Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00693 ATGATCACCATGAACCAAAACGAAATGGTGGTGGATGAAGGCCTCCTTCACGATATCATGCTTAACTCACCCTCCCTCCACCACCTTCCTCAAACCACGCACTACAATTACAATTACAATTATAACCCCTTCGATGATACTACCGTCTCCTGGATAAACGACGCCGTTTCTTCTCCCTCTCAGTCTCAGCTCACTACCACCGCCCTTCACCTACCACCACCACCGCCGCCGCCACCACTGATTGATCATCAACAAACGGAGTTGCTGCTGCCAACCGAACAGCAACAGCAAGTGGAAGAAGACTCTGCGATAAGGCTGGTCCACATGCTCATCTCATGCGCCGATTCTCTCCAGCGAGGCCACGTGGCACACGCCGCTTCCCTCATCGACGCCATGCAATCACTCCAAAGACACGTCACCACCGCCTCCGCCATCGGCAAGGTCGCCGCTCACTTCATCGGCACCTTAACACGCCGCATCTTCGCTCCTCCCCTCACCGAACGCCACGGCGGAGTCGGCGATCCTCGAGGCCTTCAGCGGCCACTCCTCCGTCCACGTCGTCGACTTCCACCTCGCGCATGGACTCCAGTGGCCGCCACTCATCCAGGCGCTCGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCCGGCGGTCCCCCCTCCCTCCGCATCACCGGCATTGGCCCTCCCTCTCCGGACCGCCGGGACGCCCTCCGCGAAACCGGCATCCGCCTCGCCGAACTTGCCCGCTCCGTCAACGTCCGGTTCGCTTTCCGAGGAGTCGCTGCGTCAAGGCTTGAGGACGTGGAGCCGTGGATGCTACAGGTGCGGCAGGAGGAGGCGGTGGCGATCAACTCCGTCATGCAGCTCCACCGACTCCTAGGATCCGATTCGGGAATCGACTCGGTCCTGGGTTGGATCCGGAGGTTAAACCCTAAGATCGTAACCGTGGTTGAACAAGAAGCGAATCACAACCAGACCGGGTTCTTGGAACGATTCACGGAAGCGCTGCATTACTACTCGGCCGTTTTCGACTCGCTAGAGGCTTGCCCAAACGAACCGGATAAGTCGCTAGCCGAAATGTACCTGGAGAGAGAGATTGGCAACGTGGTTTGTTGTGAGGGGCCGGCTCGGGTGGAGAGGCATGAACCGCTGGCCCAATGGAAGGCCCGGTTGGAGAAATCAGGGTTTAAGTGCGTGGGCCTGGGCTCAAATGCGTTAAGGCAGGCGAGCATGTTATTGAGCTTGTTCTCAGCTGAGGGGTACTGCGTTGAAGAGAAGGAAGGATGTTTGACTTTGGGTTGGCATGGGAGGCCCCTCATTGCTGCTTCGGCTTGGCAACCCTTTCCCCTCACCCCTGACCCACACCCGCACCCACATTGGCTTCCTTAG 1485 0.5407 MITMNQNEMVVDEGLLHDIMLNSPSLHHLPQTTHYNYNYNYNPFDDTTVSWINDAVSSPSQSQLTTTALHLPPPPPPPPLIDHQQTELLLPTEQQQQVEEDSAIRLVHMLISCADSLQRGHVAHAASLIDAMQSLQRHVTTASAIGKVAAHFIGTLTRRIFAPPLTERHGGVGDPRGLQRPLLRPRRRLPPRAWTPVAATHPGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGPPSLRITGIGPPSPDRRDALRETGIRLAELARSVNVRFAFRGVAASRLEDVEPWMLQVRQEEAVAINSVMQLHRLLGSDSGIDSVLGWIRRLNPKIVTVVEQEANHNQTGFLERFTEALHYYSAVFDSLEACPNEPDKSLAEMYLEREIGNVVCCEGPARVERHEPLAQWKARLEKSGFKCVGLGSNALRQASMLLSLFSAEGYCVEEKEGCLTLGWHGRPLIAASAWQPFPLTPDPHPHPHWLP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00693 494 PANTHER OS05G0574900 PROTEIN 48 168 - -
Aip10g00693 494 PANTHER OS05G0574900 PROTEIN 247 482 - -
Aip10g00693 494 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 168 IPR005202 -
Aip10g00693 494 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 247 482 IPR005202 -
Aip10g00693 494 ProSiteProfiles GRAS family profile. 97 478 IPR005202 -
Aip10g00693 494 MobiDBLite consensus disorder prediction 239 269 - -
Aip10g00693 494 Pfam GRAS domain family 247 478 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00693 Aip-Chr10 7839682 7841258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00693 247 478 GRAS Transcription Factor Family AT1G14920 56.596 9.25e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip10g00693 GRAS 7.6e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00693 K14494 - gmx:100814551 380.563