Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00692 ATGAAGGATCCAAAGGAGGATGAAGAGAAATCTAGGAGGGTTGTGGAGAAATCCACGGAGCTTAGAAGAAGGGGAAGAAGGAGAAACAAGCAATGCAGCAAAGCAGATAGATTACAAGAGAAAGGATTTGATTCACAGCTTGTGTCCTCTACTTGTTCCAAGAATCTTGTGTTCGCTGCAAGGCCTGGCTATGGCCACCTTGGAACAAAATGTGTCGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCAGCCATTACACTGTTAAGATAATACCTGAAGTGAGGTGTCGCAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGAGTTGGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGATTGAAGATGATGAGAGTATTGGTACTACCAGTGGAAAACAAGTGGACACACCACAAGAAGCACTTACTGTTATTGACATTGTTCTGAGGGAGCTTGCAGCACAGAGTTACGTGCCCATTGGGAGGTTTCTGTATTCTCCTGATTTTAGAAAACCACAGCAGCTTGGTGGTGGCTTAGAATCATGGCGTGGATTCTACCAAAGTATAAGGCCTACCCAGATGGGTTTATCACTTAATATTGACATGTCATCAATGGCGTTTATTGAGCCACTCCCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACACATAGAGGGAGTTTTAGAAGGAAGTACAGGATATCAGGATTGACATCACAGCCAACAAGGGAGCTTAACTTCCCTCTTGATGAGAAAATGAACATGAAATCAGTGGTTGATTATTTTCAAGAAATGTATGGATACACAATCAAGTATCCTCATCTACCTTGTCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCAATGGAGGCATGCAAGATAGTTGGAGGCCAGAGGTATACAAAAGGGCTAAACGAAAAGCAGATAACTTCTCTCTTGAAGGTCTCATGCCAGAGACCACGCGAACAAGAGACAGATATTCTTCAGACAATTCAAGAAAATGATTATGAATATAATCCGTATGCGAAAGAGTTTGGTATAAGTGTAGACAGCAAGCTTACATCAGTTGATGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCATGACACTGGAAGAGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTAATAAATGGAAGCACTGTAAGATACTGGGCATGTATCAATTTCTCAAGAAGTGTTCAAGAAAGCACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTTAGCCAGGACCCTGTGATTCCTGTATATTCAGCAAAACCTGATCTAGTTAAGAAGGCTTTGAAGTATGTACATTCAGCTTCTCTAGAAAATCTTGGTGGCAAGGAGCTAGAGTTGCTTATTGCAATTCTTCCAGACAACAATGGCTCTCTATATGGTGATCTCAAAAGAATCTGCGAAACTGATCTCGGGTTGATTTCTCAGTGTTGTCTTACAAAGCATGTATTCAAGATTAATAGACAGTACTTGGCAAATGTTGCACTCAAAATCAATGTCAAGATGGGAGGAAGGAACACAGTGCTTTTGGATGCTTTAAGTTGGAGGATCCCATTGGTTAGTGACATTCCAACAATAATTTTTGGAGCTGATGTAACTCATCCAGAATCCGGAGAGGACTCTTGTCCTTCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCAGAAGTAACAAAGTACGCAGGATTGGTTTGCGCGCAGCCTCATCGGGAAGAACTCATACAAGATCTTTTTAAATGCTGGAAAGATCCTCATCATGGTGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACTGGACAAAAACCACTGAGGATAATATTTTACAGGGACGGGGTAAGCGAAGGACAATTCTACCAAGTTTTGCTATATGAACTTGATGCCATTCGTAAGGCTTGTGCATCTTTGGAACCAAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGTCATCATACTAGACTCTTCTCAAGCAATCATGATGATAGAAATAGCACTGACAAGAGTGGCAATATCTTACCTGGTACTGTGGTTGATTCTAAGATCTGTCATCCTACAGAATTTGACTTCTATTTATGCAGTCATGCTGGAATTCAGGGTACAAGTAGACCAGCTCACTACCATGTCTTATGGGATGAGAACAATTTCACTGCTGATGAAATTCAGTCTCTCACCAACAACTTATGCTACACTTATGCAAGGTGTACAAGATCTGTTTCAGTAGTGCCTCCTGCATACTATGCTCATTTGGCAGCATACCGAGCTCGATTCTACATGGAACCTGGTGCCACTGAGATTTCTAAAGCGCGTGGTGCAAGATCAAAAGATGGTTCAGTTCGGCCACTCCCAGCTCTCAAAGAAAAAGTCAAGAATGTCATGTTCTACTGTTGA 2661 0.4171 MKDPKEDEEKSRRVVEKSTELRRRGRRRNKQCSKADRLQEKGFDSQLVSSTCSKNLVFAARPGYGHLGTKCVVKANHFLADISASDLSHYTVKIIPEVRCRKTSKAIIAELVRVHKNTELGMRLPVYDGGRNLYTAAMLPFTYKEFTILLIEDDESIGTTSGKQVDTPQEALTVIDIVLRELAAQSYVPIGRFLYSPDFRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGSFRRKYRISGLTSQPTRELNFPLDEKMNMKSVVDYFQEMYGYTIKYPHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIQENDYEYNPYAKEFGISVDSKLTSVDARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPVYSAKPDLVKKALKYVHSASLENLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPGATEISKARGARSKDGSVRPLPALKEKVKNVMFYC 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00692 886 ProSiteProfiles PAZ domain profile. 241 355 IPR003100 GO:0005515
Aip10g00692 886 MobiDBLite consensus disorder prediction 1 35 - -
Aip10g00692 886 Pfam Argonaute linker 2 domain 383 427 IPR032472 -
Aip10g00692 886 CDD PAZ_argonaute_like 240 354 - -
Aip10g00692 886 SUPERFAMILY PAZ domain 236 395 IPR036085 GO:0005515
Aip10g00692 886 Gene3D - 598 886 IPR036397 GO:0003676
Aip10g00692 886 SMART PAZ_2_a_3 245 377 IPR003100 GO:0005515
Aip10g00692 886 Pfam Argonaute linker 1 domain 189 238 IPR014811 -
Aip10g00692 886 SUPERFAMILY Ribonuclease H-like 519 850 IPR012337 -
Aip10g00692 886 Pfam N-terminal domain of argonaute 69 154 IPR032474 -
Aip10g00692 886 SMART Piwi_a_2 529 850 IPR003165 GO:0003676
Aip10g00692 886 CDD Piwi_ago-like 399 849 IPR045246 -
Aip10g00692 886 Pfam Mid domain of argonaute 438 515 IPR032473 -
Aip10g00692 886 SMART DUF1785_2 188 240 IPR014811 -
Aip10g00692 886 Gene3D - 419 592 - -
Aip10g00692 886 Pfam Piwi domain 530 849 IPR003165 GO:0003676
Aip10g00692 886 Pfam PAZ domain 245 371 IPR003100 GO:0005515
Aip10g00692 886 PANTHER PROTEIN ARGONAUTE 10 23 885 - -
Aip10g00692 886 Gene3D paz domain 235 359 - -
Aip10g00692 886 MobiDBLite consensus disorder prediction 1 22 - -
Aip10g00692 886 ProSiteProfiles Piwi domain profile. 529 850 IPR003165 GO:0003676
Aip10g00692 886 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 23 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00692 Aip-Chr10 7833683 7838436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00692 54 886 Eukaryotic Initiation Factors Gene Family AT5G43810 72.486 0.0 1345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00692 K11593 - gmx:100798086 1608.19