Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00691 ATGGAGGTGTCTTTGAGCCAGGAGGATGCTGATCGTGGAGGGAGTGATGGTGATGCTTACGATGTAGAAAATTTTGAGTTGGAAGACCTTGCCGGACTAAGTGTGAATGACATCCTTAAGAAGGTATGGGATAGCGTTGATAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGGATGGATTCGGTGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTTGTAAGGTACAGGTTTTTTTGCAACAAGGAAGGCTTCAGGGAGCGTAAACACTACGACAGGGTTGACAGAATGAGGGTACACAAACCAGAAACAAGAACTAACTGCAAAGCAATGTTATCGGTTTATTTAGACAAAAATGATCAGTATTGGAAGGTTAGGAAGTTAGTAACCAAACACAATCACGACCTGACACCGGCAGGAATGGTGCACTTGATTGCCAACCATCGTCGGTTAACGGAAGTTGCAAAGAGTCAGATAGTTGGGATGGAAGCACATGGTATTGTGACCTCTAAGATTGTAGGGTACATGGCTGGTATGGCCGGGGGATATTCGTTGTTGGGGTTCCTGAAGAAGGATGTCTATAATTATGCTGACAAAATGCGGCGCATTAAAATAGTTGATGGCGATGCGAATTCTGCATTAGTATATCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACCACTGACAACAGGCTGGCGAATCTGATTTGGGCCGACGGATGTAGCAGAGTCGATTACCAATACTTTGGCGATGTGTTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGACCTGTTGTGATTTTCTCTGGATCAAACAATCATAAGCAGACCACCATATTCAGGTTTGGGATGTTGCATGACGAAAGTCTAGCATCCTATCGGTGGATGCTGGAGAATTTGATGGAGATTATGTGTCGCAAGAAGCCATCTGTAGTGGTTACCGTTGGGGACAAAGCTATGATCAAAGCCGTGTCTGAAGTCCTCCCCGAGTCGACGCATCGGTTGTGTGCATGGCATGTGGAGAAGAATGTCACATCGAATGTCAAGGATGATGATTTACGTGGGCTGTTTAGAAGGTGGTTGTACGCGGACATGACGACAGATGTATTTGAGTCGGAATGGGAGCAGGCTGCCGAGGACTATGGCCTCTGCCAGAAGCAGTGGTGGTGCCAAATGTATGAGAAAAAGGAGATGTGGGCAAGTGCTTATCTCCGTGACAAGTTCTGCACGGGGTACCGGACCACATCTCGCTGTGAAGAAATTAACGCATATGTGAACAAGTTTTCCAAATCCACCCACACAATTTTGGAGCTGGTGCAATGCTTAGATATGGTTGCCCGTGAATATCGGAATAAGGAAATGCTTCTCCAGTTTAAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTTAGAAGTCTTGAACGACATGCCGCTTCAGTGTACACCAGATAA 1497 0.4562 MEVSLSQEDADRGGSDGDAYDVENFELEDLAGLSVNDILKKVWDSVDNAYEFYRGFGKLDGFGVRKGDSGKDCEGNLVRYRFFCNKEGFRERKHYDRVDRMRVHKPETRTNCKAMLSVYLDKNDQYWKVRKLVTKHNHDLTPAGMVHLIANHRRLTEVAKSQIVGMEAHGIVTSKIVGYMAGMAGGYSLLGFLKKDVYNYADKMRRIKIVDGDANSALVYLEGKAESDPMAIAKYNVTTDNRLANLIWADGCSRVDYQYFGDVLAFDSTYRKNKYKRPVVIFSGSNNHKQTTIFRFGMLHDESLASYRWMLENLMEIMCRKKPSVVVTVGDKAMIKAVSEVLPESTHRLCAWHVEKNVTSNVKDDDLRGLFRRWLYADMTTDVFESEWEQAAEDYGLCQKQWWCQMYEKKEMWASAYLRDKFCTGYRTTSRCEEINAYVNKFSKSTHTILELVQCLDMVAREYRNKEMLLQFKSINSVPVMTTCLRSLERHAASVYTR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00691 498 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Aip10g00691 498 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 497 IPR031052 GO:0006355
Aip10g00691 498 Pfam MULE transposase domain 263 357 IPR018289 -
Aip10g00691 498 PANTHER OS02G0262500 PROTEIN 36 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00691 Aip-Chr10 7774445 7775941 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00691 MULE 5.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00691 - - aip:107620053 1026.16