Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00686 ATGGCGCTGATCTCTCGCAGCGTTACTATTGTCTTTTTCCTCCTCGTGATGGCGAGTTACCGGGTCAACTCGGAGCCAACTCAGGACAAACAATCCCTCCTTGCTTTCATCTCGAAAACAAAACACCAGAATCGAATCCAATGGAACGCGTCCGACTCGGCCTGCAACTGGGTCGGGGTTCAATGCGACTCGTCCAATTCTTACGTGTACTCGCTCCGCCTGCCCGCCGTTGGACTAGTGGGGCCCATCCCTCCCGACACCATCGGCCGCCTCGCCAACCTCCGCGTTCTCAGCCTGCGCTCCAACGGCCTCACCGGCCAGATCCCCTCCGATTTCTCCAACCTCACCTTTCTCCGCGGCCTCTACCTCCAGAAGAATGAGCTCTCCGGCGAGTTCCCTTCCTCCGCCACTCGCCTAACTCGCTTGACTCGCTTGGATCTCTCCTCTAATAACTTCACAGGCTCCATTCCTTTCTCGGTCAACAACCTCACTCACCTCACTGGTCTCTTTCTCCAGAACAACAGCTTCTCCGGCACACTCCCCAGCATAACCGCCAAATTGAACGACTTCAACGTCTCCAACAACAATCTCAACGGCTCCATCCCCAAGACACTCGCAAAATTCCCCAAATCCTCTTTCGCCGGAAACATAGATCTTTGCGGCGGACCTTTACCGGCCTGCAGCCCGTTCTTCCCGGCGCCGGCGCCCTCGCCGGGGGAAATTCCACCTGGAAAACCTGTTCACAAGAAGTCAAACAAACTATCCACCGGCGCCATTGTTGGAATTATCATCGGCTCCGTCGTCGGCTTGCTGCTTCTGCTTCTTCTACTCTTCCTCTGTCTCAGAAAGAGGCAGCGGCGGCAACCTGCAAAACCTCCGAAACCGGTAGTTCCTGTTGCCGCACGTGGAGTACCGGCGGAGGCAGGAACTTCGTCGTCGAAGGAGGACATAACGGGAGGATCAGCGGAAGCAGAGAGGAACAAATTGGTGTTCTTCGAGGGAGGAGTGTACAGCTTTGACTTGGAGGATCTGCTTCGGGCGTCGGCGGAGGTTCTTGGAAAAGGGACCGTGGGTACGTCGTACAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTTGTGAAGAGGCTGAAGGACGTAGTTGTTACTAAGAAAGAGTTCGAGATGCAAATGGAGGTTCTTGGGAAGATCAAACACGATAATGTGGTTCCTCTCAGAGCTTTCTATTACTCCAAAGATGAGAAGTTGCTCGTTTACGATTACATGTCCGCCGGCAGCCTCTCTGCTCTTCTCCACGGGAGCAGAGGGTCTGGGAGAACACCGTTAGACTGGGACAACAGAATGAAGATTGCACTAGGAGCAGCAAGAGGCCTAGCATGCCTCCACGTGTCAGGCAAAGTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTACGCGGACCGGACCATGAAGCTGCCGTTTCAGACTTCGGCCTCAACCCATTGTTCGGAAACGGGGGCCCCTCGAACCGCGTGGCAGGCTACCGGGCTCCTGAGGTGGTAGAAACCCGAAAGGCAACCTTCAAGTCTGATGTGTACAGCTTTGGAGTGTTTCTGTTGGAACTATTAACAGGGAAGGCACCAAACCAAGCGTCGCTTGGGGAAGAAGGCATCGATCTCCCCCGGTGGGTGCAATCGGTGGTCCGGGAGGAGTGGACGGCGGAGGTGTTCGATGCGGAGCTGATGAGGTTCCATAACATAGAGGAAGAGATGGTTCAGTTGTTGCAGATTGCAATGGCTTGTGTGTCTGTTGTGCCGGACCAAAGGCCCAACATGCAAGACGTGGTTCGCATGATTGAGGAGATGAACCGTGGCGAGACCGATGAGGGTTTGAGACAGTCGTCTGATGATCCTTCTAAAGGATCGGAGGGTCATACTCCACCCCAGGAGAGCAGAACCCCACCCAGATCGGTCACACCGTAA 1962 0.5515 MALISRSVTIVFFLLVMASYRVNSEPTQDKQSLLAFISKTKHQNRIQWNASDSACNWVGVQCDSSNSYVYSLRLPAVGLVGPIPPDTIGRLANLRVLSLRSNGLTGQIPSDFSNLTFLRGLYLQKNELSGEFPSSATRLTRLTRLDLSSNNFTGSIPFSVNNLTHLTGLFLQNNSFSGTLPSITAKLNDFNVSNNNLNGSIPKTLAKFPKSSFAGNIDLCGGPLPACSPFFPAPAPSPGEIPPGKPVHKKSNKLSTGAIVGIIIGSVVGLLLLLLLLFLCLRKRQRRQPAKPPKPVVPVAARGVPAEAGTSSSKEDITGGSAEAERNKLVFFEGGVYSFDLEDLLRASAEVLGKGTVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDNRMKIALGAARGLACLHVSGKVVHGNIKSSNILLRGPDHEAAVSDFGLNPLFGNGGPSNRVAGYRAPEVVETRKATFKSDVYSFGVFLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPNMQDVVRMIEEMNRGETDEGLRQSSDDPSKGSEGHTPPQESRTPPRSVTP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00686 653 MobiDBLite consensus disorder prediction 615 653 - -
Aip10g00686 653 Gene3D Transferase(Phosphotransferase) domain 1 421 633 - -
Aip10g00686 653 SUPERFAMILY Protein kinase-like (PK-like) 350 613 IPR011009 -
Aip10g00686 653 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Aip10g00686 653 Pfam Protein kinase domain 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00686 653 MobiDBLite consensus disorder prediction 615 632 - -
Aip10g00686 653 PANTHER OS05G0588300 PROTEIN 9 633 - -
Aip10g00686 653 Gene3D Ribonuclease Inhibitor 185 230 IPR032675 -
Aip10g00686 653 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Aip10g00686 653 Gene3D Phosphorylase Kinase; domain 1 313 420 - -
Aip10g00686 653 ProSiteProfiles Protein kinase domain profile. 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00686 653 SUPERFAMILY L domain-like 48 208 - -
Aip10g00686 653 CDD STKc_IRAK 352 615 - -
Aip10g00686 653 PANTHER OS05G0480400 PROTEIN 9 633 - -
Aip10g00686 653 MobiDBLite consensus disorder prediction 633 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00686 Aip-Chr10 7442839 7446594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00686 8 633 Receptor kinase-like Gene Family AT5G58300 53.774 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip10g00686 Pkinase 7.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00686 - - gmx:100806857 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00686 10 7442839 7446594 Aip10g00686 10 7442839 7446594 ECH