Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00681 ATGGAAGATTACAATTTTGCTATGAAAAGGATGACGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAATTGACAATCACATTGTGGGATCCCAACCACAGAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAACAAGGAGGTGCCACGAACTCGATGTTCGACATATGAGGAGGCCGGCAATAGACTTTGATCCAAACTCCTTGCAAAATATTCTACCTAAAGCATCTTATCATTGGAATGGGCAATCTCATAGGGAAAAGAAAGAGTTTACGTGCATTGTACTGCTGGACTTGGGAGAGCACCAGGGGTGA 408 0.4191 MEDYNFAMKRMTRNPYEYHHDLGMNYTLIIDNHIVGSQPQKPEDIDHLKKEEGVTYILNLQQDKDVEYWGIDLKSITRRCHELDVRHMRRPAIDFDPNSLQNILPKASYHWNGQSHREKKEFTCIVLLDLGEHQG 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00681 135 Gene3D Protein tyrosine phosphatase superfamily 8 122 IPR029021 -
Aip10g00681 135 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 109 - -
Aip10g00681 135 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 107 IPR029021 -
Aip10g00681 135 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00681 Aip-Chr10 7203539 7204493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00681 1 111 Protein tyrosine phosphatase (PTP) family AT3G10940 76.991 3.96e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00681 - - adu:107488438 202.601