Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00669 ATGACTTTCAAGCGCAGAAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGCCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAATATTGTGTTTCGTGTGCTATTCACTCTCACGTTGTGAGGGTGCGATCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAGCGCTTTGCTAGGCGCAGGGATGATGCACCAAGGCCTGGTCAACCTGGTCAAGCTCCTCGTCCTATTGGAGCTGGAGCTGGAGCTGGAGCTGCTCGTCCTTAA 399 0.5188 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPIGAGAGAGAARP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00669 132 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g00669 132 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Aip10g00669 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g00669 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 - -
Aip10g00669 132 MobiDBLite consensus disorder prediction 85 132 - -
Aip10g00669 132 MobiDBLite consensus disorder prediction 89 110 - -
Aip10g00669 132 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00669 Aip-Chr10 6949828 6951026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00669 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 5.85e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00669 K02976 - gmx:100305706 196.823