Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00665 ATGGGAGACGGAGATAGAAATTGGTGGTGGTGGTTGGTGGTGGCGCCGGTGGTTGCAACAAGAGAGATGGATGAGAGGATGAGCGATGGTTGGGAAGAAAAGTGGAGGTGTTGGAATGGAATGAAGTTGGGAAGAACAAGGAGAGGCGTTGGAAGGGATTATGCAGTGTGCCAAACACTATCAGGATTAGAGGAAAAGAAACCCATGGCTATGGAGAACAACTATTCATACCCATCTTACCCAGACTCAGGGGACTCTTCTCCGCGCTCAAGAGAGATCGACTTCGAGAACCCTCCTCCATGGGACGACCAACAACCGCCACCCAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCTCGCACCCACGACAACCAGCTCTCCTACGTCGCCGGCGAGACCAAGATCCTCGCCGTCGACCTCAACATCAAGTTTAACGCCATGATCGCCAAGCTCTCCGCCCTCTGCGGCTGCGACCCCAAGGACCTCTCCTTCAAGTACCAGCTCCCTGGTGAGGATCTTGACGCTCTCATCTCCGTCACTAATGATGACGACCTTGACCACATGATGCACGAGTACGATCGACTCTACCGTGCTTCCGCTAGACCTGCCCGCATGCGATTATTCCTCTTCCAAGCCAACACTACTAACACTAACAGTAATAACAACCTTCCTCCCTCTTCTGATAACCGTCTTGACCCGGTCCAACCAGACCCGCTCAAACCGAATCCCAACGTGGATTATCTCTTTGGTCTTGAGAAGAATACTGCTGTTAATGTTGCTCCTCAGCAGCTTCAGCCACCTGCGCCGTCACCGCCGGCGGCTCCTGTCCCGGTGAAGTTCCATGATACGGTGCCGGAGCCTGTCCCGCCGCCGCCGGAGTACCAACAGAGAGTTGCCGTTAATACCTCCGATCGTGTCGTTGGATCGGATCCGAACTTGAGCCACCCGCTGGAAGTTCAGAGGCAGTTTCAGAGGATGCAAATTTCGGAAAGCGATCAAGCTGCTGCGTATCGGAGGAAGAGCGAGGAAGCTCTCGTCGGGAATTACGCCCCTACCGGCGGTGACTATTACGCTCAGAAAGCTCCTCCGGCGAGTGCGCCGTTACAACCTGGATATTGGCCTGATAAGCATGTTTCCAGCGAGGCCTATCATCAGGCGGCATCGTCCGCTGCCGGCGGTGGTGAGCCGCCGGTTTATGTGATTCCGGCGCATGGAGCGTTCTATCATCACGCGCCTGTAGTTCGTCCACAGACTCCTCCACCGACAACGCAGGGTTACTACGCGGTGCAGCGAATGGCTTCCGACGGTTACCGCGAAGCTCCGTTGTACGGCGGCGTGCCGCCACATAAGCCGCCGTTTTCTTCGGCTGCTCCGGCGAACATGGCACCACCACAGCCGCTTAAAGGTCCCGGTTATACGGAAGGATTCGGGGTGGTTAGGCCAGTTGGGATGCAGGATAATACCGGTGCGGCTTACGCACAGGTGGCGTACGATAGTGGAAGTGGAAGACAGGTTTACTATACTGCGCCGGGTGGTGGTGTCATGCACGCGCCGCCGTACCAAGGGGTTACTCAGGCGCTAACCGGTGGTGGGGTGTCGTTGGGTCAAGATGGTAAGGTCATAAGCAAGGTTTCTCAAGGTTCTGTGTGA 1665 0.5586 MGDGDRNWWWWLVVAPVVATREMDERMSDGWEEKWRCWNGMKLGRTRRGVGRDYAVCQTLSGLEEKKPMAMENNYSYPSYPDSGDSSPRSREIDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVAGETKILAVDLNIKFNAMIAKLSALCGCDPKDLSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFQANTTNTNSNNNLPPSSDNRLDPVQPDPLKPNPNVDYLFGLEKNTAVNVAPQQLQPPAPSPPAAPVPVKFHDTVPEPVPPPPEYQQRVAVNTSDRVVGSDPNLSHPLEVQRQFQRMQISESDQAAAYRRKSEEALVGNYAPTGGDYYAQKAPPASAPLQPGYWPDKHVSSEAYHQAASSAAGGGEPPVYVIPAHGAFYHHAPVVRPQTPPPTTQGYYAVQRMASDGYREAPLYGGVPPHKPPFSSAAPANMAPPQPLKGPGYTEGFGVVRPVGMQDNTGAAYAQVAYDSGSGRQVYYTAPGGGVMHAPPYQGVTQALTGGGVSLGQDGKVISKVSQGSV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00665 554 MobiDBLite consensus disorder prediction 74 106 - -
Aip10g00665 554 CDD PB1_UP2 115 215 - -
Aip10g00665 554 Pfam PB1 domain 127 216 IPR000270 GO:0005515
Aip10g00665 554 SUPERFAMILY CAD & PB1 domains 127 225 - -
Aip10g00665 554 MobiDBLite consensus disorder prediction 220 234 - -
Aip10g00665 554 MobiDBLite consensus disorder prediction 220 245 - -
Aip10g00665 554 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 73 548 - -
Aip10g00665 554 SMART PB1_new 126 217 IPR000270 GO:0005515
Aip10g00665 554 PANTHER OS05G0427100 PROTEIN-RELATED 73 548 - -
Aip10g00665 554 Gene3D - 132 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00665 Aip-Chr10 6914930 6917433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00665 111 223 MAP Kinase Kinase Kinase AT3G46920 42.982 1.56e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00665 - - adu:107480527 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00665 10 6914930 6917433 Aip10g00665 10 6914930 6917433 ECH