Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00640 ATGGCTTTGCCGGCTATTGGTTACCTATGTGTGAAAGTTGATGATTCCTTGCAATACTATACAATTGTGAAGCTGGCTGCAGCTACGGCCAGCAAGGTTGCAGCAGCAGCAGCGTGGCCAAAGGTGAATGCTAGTCAATGTCGAGCGGGAAGGCCAAGATGTGAGAGGAAGACCACGACCCAAGCTCCGGCGGCGGCGGCATGGACGAGCTCCTCGCCGCTCTTGGTTACAAGATTCTCCCTTTCTCTTGTTGCAATCAAAGAGATCAAGAGGGATCACAGTGAAGCTGGCTCTAGCTACGGCCAGCAAGGTAGCAGCAGCAACAGCGTGGCCAAAGGCGAATGCTCGTCAATGTCGAGCAGGAAAGCCAAGATGTGGGAGGAAGACCATGACCCAAGCTCTGGTGGCGGTGGCATGGACGAGCTCCTCGCTGCTCTTCATTACAAGGTTCGCAACTCAGACATGGCTAATGTGGCCCAGAAGTTAGAGactaaacggcgacatttcaacggtaggagagcattgtaccaaaactccgtcgttgtgccacgctggtaa 558 0.4731 MALPAIGYLCVKVDDSLQYYTIVKLAAATASKVAAAAAWPKVNASQCRAGRPRCERKTTTQAPAAAAWTSSSPLLVTRFSLSLVAIKEIKRDHSEAGSSYGQQGSSSNSVAKGECSSMSSRKAKMWEEDHDPSSGGGGMDELLAALHYKVRNSDMANVAQKLETKRRHFNGRRALYQNSVVVPRW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00640 185 MobiDBLite consensus disorder prediction 121 135 - -
Aip10g00640 185 MobiDBLite consensus disorder prediction 95 138 - -
Aip10g00640 185 Pfam Transcriptional regulator DELLA protein N terminal 140 164 IPR021914 -
Aip10g00640 185 MobiDBLite consensus disorder prediction 96 116 - -
Aip10g00640 185 Gene3D - 138 170 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00640 Aip-Chr10 6661209 6662394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00640 121 163 GRAS Transcription Factor Family AT1G14920 60.465 3.82e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00640 K14494 - mnt:21409826 74.3294