Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00632 ATGAATGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTATATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACCAGATGAGGTAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGACCCCTCCAGGTGTAAGACAAATTATGCTATTCAGTGCCACATTTCCTAAAGAGATACAGAGACTAGCCTCCGATTTCTTGTCAAGATACATTTTTCTCGCTGTTATGAGCAAATACAtttgtttttatatttaa 318 0.3931 MNDLEKGVDILVATPGRLVYLLERARVSLQMIRYLAPDEVDRMLDMGFEPQIRKIVEQMDMTPPGVRQIMLFSATFPKEIQRLASDFLSRYIFLAVMSKYICFYI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00632 105 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 94 IPR014001 -
Aip10g00632 105 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 96 - -
Aip10g00632 105 Gene3D - 1 96 IPR027417 -
Aip10g00632 105 Pfam DEAD/DEAH box helicase 2 83 IPR011545 GO:0003676|GO:0005524
Aip10g00632 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 94 IPR027417 -
Aip10g00632 105 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00632 Aip-Chr10 6601249 6602426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00632 4 89 Eukaryotic Initiation Factors Gene Family AT3G19760 37.209 2.21e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00632 K11594 - aip:110267510 208.379