Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00588 ATGGCCGAGGAGTTTCAAGCTACAATTTGTGGTGATAACTATTGGTGGAACTCAAATAGAAGTTTGTTCTCTTTGATGGGGGGATCAATGACGTGTTCTGTAGCAGCTGCTAATGATTCAGCAAACAATTATGGCTCTTTCTGGCAAGGTTCTGATTTCATGGATTTCAAGGGAGCAACAACAAAATCTTCTTTTAAAGAAGAAGATACAGACAAGTGTAGTAATAATGAATCATCAATATCAGCAGCAGTAGCAGGTGGAACCGTTGGGAGTATCTTCATCAATTCCACCTCACAAATGATGAGTTATGGCCTCTCATCTTCACCATCATCCCCTTGGAATAATCCTTCTCTATTTGGTTGTAATGAAAGGTCAGAAAACAATTTCCAATCTGTTGTGCTTCAAGAAGAAACGGGATTAGATCCTTCTAGTAATAACTCACAACAGATCCAGCAACAGCAAGAATTTTCGAGTTCCATGGGTGGTGGATTTACAGTTGAATCATCATTATCTGCATCTCATGATTACCCCTTGATGCAAGCAGGACTATTTGGTTCGACTGACTCATCATCATCACTCTTCACAACTAACCAACCAACCCTTCCTGAACTGTCACCAATATGGTCTACGGTGTCTTCCTTTACGAAGCCTTCATCATTTATGGAGCCAAAGCAACTTAATGGATTGCAATTCTCAAACAATACTCCTTTCTGTAATGCTTCAACTGAAGAGACACTTTATAATATAAGATCTGATATCTTTTCTTCGTCTTCTTCTCAACCACAGCTATATCAAACATCACCAACAACTTTTGATAATAGCAAACCCAATAATGCTCTAACTAGTACTCCACTCAACAAGTTGAAGAGAGAAGAATCTCCAGAAAAAGCATCATCATCAGTCTGTAGCAAAAATGTTTCTGGGCGCGTCTTCAAAAAAGCAAGAATTGAAACGCCATCTCCTTTGCCTACTTTTAAGGTTCGAAAAGAAAAGTTAGGGGACCGAATTACTGCTCTTCAGCAATTGGTATCACCTTTTGGAAAGACGGACACTGCATCGGTTCTACATGAAGCCATTGAGTACATCAAATTTCTTCATGATCAAGTCAATGTTTTAACTGCTCCATATATGAAAAATGGGTCTTCCATTCAAGATCAACAGGGATGTGATTATGAAAAGGATTCAAAATGTTTAACGCAAGATTTGAGTAGTCGAGGGCTTTGTTTGGTACCAGTTGCAAGCACATTTCCGATGGCTACTGAGACCACCGCTGATTTTTGGACGCCTACATTTGGAGACTCACTCATCGGCAATGTGGCAGGTAGTCATCAATGA 1335 0.397 MAEEFQATICGDNYWWNSNRSLFSLMGGSMTCSVAAANDSANNYGSFWQGSDFMDFKGATTKSSFKEEDTDKCSNNESSISAAVAGGTVGSIFINSTSQMMSYGLSSSPSSPWNNPSLFGCNERSENNFQSVVLQEETGLDPSSNNSQQIQQQQEFSSSMGGGFTVESSLSASHDYPLMQAGLFGSTDSSSSLFTTNQPTLPELSPIWSTVSSFTKPSSFMEPKQLNGLQFSNNTPFCNASTEETLYNIRSDIFSSSSSQPQLYQTSPTTFDNSKPNNALTSTPLNKLKREESPEKASSSVCSKNVSGRVFKKARIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLTAPYMKNGSSIQDQQGCDYEKDSKCLTQDLSSRGLCLVPVASTFPMATETTADFWTPTFGDSLIGNVAGSHQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00588 444 CDD bHLH_AtbHLH_like 322 372 IPR045239 -
Aip10g00588 444 MobiDBLite consensus disorder prediction 258 287 - -
Aip10g00588 444 Gene3D - 326 387 IPR036638 GO:0046983
Aip10g00588 444 MobiDBLite consensus disorder prediction 258 299 - -
Aip10g00588 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Aip10g00588 444 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 421 - -
Aip10g00588 444 MobiDBLite consensus disorder prediction 138 162 - -
Aip10g00588 444 PANTHER TRANSCRIPTION FACTOR BHLH103 57 421 - -
Aip10g00588 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 378 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00588 Aip-Chr10 6050070 6052862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00588 1 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 36.830 4.65e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00588 - - adu:107468661 802.742