Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00584 atgttCATCCTCCACCGCCGTAAGGAGAGACAGCgctgccgccgttcgtgtagcccctcgcccctcgacgctcgccgtagtctccccactcgccgtcctgctgtccatcgaagGCACAAAGGAATAACCGGACAATTGAAGATTGAGGGATTTTCAGATTTGTTGTTTGAGTCGTGGCAACTTTGCAGTAGAGCATCGCACAAATTTTTTGTATGCACTGAGGAAATGGACGAATTGTTAGTTGATAGTGATGGCAATGATGTTGAAGACCTGTTACTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCAGACCTTGATGTTGCGTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGGTGTGGGTGTGTAGCACAAATGCAAGTTCACATAGATGTTGGCAGGGACTGGTGGTATACAACATTATTTCAAAATGAACATAATCATGAGTTAGTACCCCCAACTTTGAGCCGGATGTTGAGATCGCAACGGAGAATGACTGATCAAGAAATTCAAAGAATGAACGACATGAGAGATGCTGGAATTCCCACAACCCAAATCTATATGCATTTTGCCGAGCAATCTGGTGGTTTTGAGAATGTTAGATTTCAAAGAAAAGACATGTACAACCAAATAGAAAAGCAAAGGCAATTGATGGAAAGCGATGTGACCGAAACGTTGAAGTACCTAAAGAAGCGGAAGAAATTAGATCCAAAGTTTTACTGGAGTTACGAGGTGGATAACAATGGTGTGTTTCGGCACCTAATCTGGATGGACGGGAAGAGCCGTGTTGACTTTGAAGTATTTGGTGATGTTATGGCCTTTGATGCAACTTACAAGAAAAATAAGTACAAGTTTCCATTGGTAGTTTTCTCAGGAGTGAACCATCACCTTCAAACAATAGTTTTTGGCAGTGCAATTGTGGCTGATGAAGGAGAAGGAACTTACATATAA 1146 0.3787 MFILHRRKERQRCRRSCSPSPLDARRSLPTRRPAVHRRHKGITGQLKIEGFSDLLFESWQLCSRASHKFFVCTEEMDELLVDSDGNDVEDLLLNSIGSIGRVNFVGLSVDAAKKYVFSDLDVAYAFYNAFGRVNGFSIRKFKVGRSEIDKRILWQTFVCSRQGYRIFRGVDETNRKRAPKPETRCGCVAQMQVHIDVGRDWWYTTLFQNEHNHELVPPTLSRMLRSQRRMTDQEIQRMNDMRDAGIPTTQIYMHFAEQSGGFENVRFQRKDMYNQIEKQRQLMESDVTETLKYLKKRKKLDPKFYWSYEVDNNGVFRHLIWMDGKSRVDFEVFGDVMAFDATYKKNKYKFPLVVFSGVNHHLQTIVFGSAIVADEGEGTYI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00584 381 Pfam MULE transposase domain 336 380 IPR018289 -
Aip10g00584 381 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 116 380 IPR031052 GO:0006355
Aip10g00584 381 PANTHER OS02G0262500 PROTEIN 116 380 - -
Aip10g00584 381 MobiDBLite consensus disorder prediction 15 37 - -
Aip10g00584 381 Pfam FAR1 DNA-binding domain 126 217 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00584 Aip-Chr10 5983826 5989889 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00584 FAR1 9.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00584 - - aip:107623722 619.387