Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00582 ATGGAGAGAAGAACACACTTGAACCTTTCTTTTTCATTTCTTGTCACTTTTTGCTACTTCTTCATAGCCATTTTTGCAACATTTTTGGAAGCATATGATACCTTAAGTCCACCAAAAACCATCACTGGCAACAAAACACTAGTCTCACCTTCCCAGAATTTTGAACTAGGTTTCTTTAATCTTGGTAGCAACTCCACTCGCAGATATCTTGGGATATGGTACAAAAATGTTCCTAAGAAAACTGTTATTTGGGTTGCAAATAGAGACAATCCACTTGCTCATGATTTTGGTGATGATGGATCCTTAACATTCAGCAATGATGGGAAACTCATAGTTCACAGCCACAAAGGAAGTGTTATATGGTCTTCAAATTCTTCTAGACCTGCAAGAAATCCAGTGGCACAGCTTCTAGACACTGGAAATCTTGTTCTTAAAGATATTGATGGAAGAAGCTCTGAGGAATATATATGGCAGAGTTTTGATTATCCATGTGACACATTGGTGCCAGGGATGAGACTTGGTTGGAGATTCAAAACCGGCTTGAACCGGCATTTGAGTTCTTGGAAGAGCAATGATGATCCTTCTAATGGAGACTACACCTACAGTGTTGACCCTCGTGGAATTCCTCAGCTTTTTCTAAACAAGAGGAGCAAGAAAATCTTCAGAAGTGGACCATGGTATGGGCAACAGTTCAAAGGTGATCCAGTTCTCAGTTCAAATCCGGTTTTCAAAGCAGTATTTGTTTTTGATTCTGATGAAGTTTCTTACTCCTATGAGGCTAAGGACAACATGATCTCGAGGTTCGTGCTTACGCCATCCGGTTCCATTCGCCATTTCTCTTGGAATGATCACAAGTCAAGCTGGGTTTCTGAGTTCTCAGTCCAAGGGGACCATTGTGATGATTATGCCCTTTGTGGTGCTTATGGAAGTTGCAGCATTGTTAAGAGCTCTTCCCCTAGTTGCAAGTGTTTGAAGGGTTTTGAGCCTAGAAAATCTCAAGATTGGTCAAGTGGATGTCTGAGGGAGGATTCAAAGGGTTGCAAAAGTGGAGGAGACTCATTTGAGAAGCTTACAGGGTTGAAACTACCAGATTCTGCAGAGTTTCATGCAAACTATAGCATTAGCATTAATCACTGTGAGGCAGAATGCTTGAAGAATTGTTCTTGTGTAGCTTATGCTAAATTAGATGTGAATGCAAGTGGCAAAGGATGTGTTACTTGGTTTGGAGATTTGTTTGATATTAGAGAGGCTCCTGTGTATGGTCAAGATCTCTATGTCAGAGTTTCAGCTTCACAACTAGATTCAAATGCTGCTAGAAACAAAAAGAAGATATTCATACTGCTTCCTGTGGCAGTATCCTTAACTTCAACAATTGTTGTTTTAGCTTTGTGGTTCATAATCAAGACATGGCAAAGAAATGGAGTTGAAAAAGAGGACCTTCAATTTAATGATGGAAGAGGTAGTAGGAGTGAGAGGAATGAATATGAACTCCCATTATTTGAGATTGCCATCATTGAAGCTGCAACTATGAATTTCTCTGTTTACAACAAGATTGGAGAAGGTGGATTTGGTCTTGTATACAAGGGTGAACTTCCATCAGGACAAGAAATAGCAGTGAAGAAACTCTTGGAAAGTTCTGGACAAGGTCTGCAGGAGTTCAAGAATGAGGTGATTTTGATCTCCCAACTTCAGCACCGAAATCTTGTAAAGCTTCTTGGCTGCTGCATTCATGGAGAAGACAAGATGTTGGTCTATGAATACATGCCAAACAAAAGCTTGGACTCATTATTATTTGATGAAACCAAGCGTCCTGTCCTCAATTGGCAAAAGAGGCTAGACATTATCATTGGTATCGCCAGAGGGCTTCTATACCTTCATAGAGATTCAAGGCTAAGAATAGTCCATAGAGACCTAAAAGCAAGTAATGTTCTTTTAGATATTAACATGAATCCAAAGATTTCCGACTTTGGAATGGCTAGAATGTTTGGTGGAGATCAAACTGAAGCAATGACCAAGAGAGTGGTTGGAACCTACGGATATATGTCGCCGGAGTATGCAATAGACGGTCAATTCTCTTTTAAATCAGATGTCTTTAGCTTCGGTGTTTTACTGTTGGAAATATTGAGCGGCAAGAGAAACAAAGGATTCTTGCACCCGGATCACAAACTCAATCTTTTAGGCCATGTGAGTATGAAAGTGAACATATATGAACTTATATCTATTTGGTTCTTTTCCTTAATATCTATGTATTTCAAAACAAAACCTGACTAA 2271 0.3959 MERRTHLNLSFSFLVTFCYFFIAIFATFLEAYDTLSPPKTITGNKTLVSPSQNFELGFFNLGSNSTRRYLGIWYKNVPKKTVIWVANRDNPLAHDFGDDGSLTFSNDGKLIVHSHKGSVIWSSNSSRPARNPVAQLLDTGNLVLKDIDGRSSEEYIWQSFDYPCDTLVPGMRLGWRFKTGLNRHLSSWKSNDDPSNGDYTYSVDPRGIPQLFLNKRSKKIFRSGPWYGQQFKGDPVLSSNPVFKAVFVFDSDEVSYSYEAKDNMISRFVLTPSGSIRHFSWNDHKSSWVSEFSVQGDHCDDYALCGAYGSCSIVKSSSPSCKCLKGFEPRKSQDWSSGCLREDSKGCKSGGDSFEKLTGLKLPDSAEFHANYSISINHCEAECLKNCSCVAYAKLDVNASGKGCVTWFGDLFDIREAPVYGQDLYVRVSASQLDSNAARNKKKIFILLPVAVSLTSTIVVLALWFIIKTWQRNGVEKEDLQFNDGRGSRSERNEYELPLFEIAIIEAATMNFSVYNKIGEGGFGLVYKGELPSGQEIAVKKLLESSGQGLQEFKNEVILISQLQHRNLVKLLGCCIHGEDKMLVYEYMPNKSLDSLLFDETKRPVLNWQKRLDIIIGIARGLLYLHRDSRLRIVHRDLKASNVLLDINMNPKISDFGMARMFGGDQTEAMTKRVVGTYGYMSPEYAIDGQFSFKSDVFSFGVLLLEILSGKRNKGFLHPDHKLNLLGHVSMKVNIYELISIWFFSLISMYFKTKPD 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00582 756 PIRSF SRK 4 743 IPR024171 GO:0004674
Aip10g00582 756 SMART serkin_6 512 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00582 756 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 729 - -
Aip10g00582 756 Pfam D-mannose binding lectin 81 189 IPR001480 -
Aip10g00582 756 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 23 729 - -
Aip10g00582 756 ProSitePatterns Protein kinases ATP-binding region signature. 518 541 IPR017441 GO:0005524
Aip10g00582 756 SMART blect_4 38 163 IPR001480 -
Aip10g00582 756 Pfam Protein tyrosine and serine/threonine kinase 514 712 IPR001245 GO:0004672|GO:0006468
Aip10g00582 756 Gene3D - 28 160 IPR036426 -
Aip10g00582 756 SUPERFAMILY Protein kinase-like (PK-like) 493 755 IPR011009 -
Aip10g00582 756 ProSiteProfiles EGF-like domain profile. 295 333 IPR000742 -
Aip10g00582 756 CDD PAN_AP_plant 347 429 - -
Aip10g00582 756 ProSiteProfiles Protein kinase domain profile. 512 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00582 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Aip10g00582 756 ProSiteProfiles Bulb-type lectin domain profile. 32 157 IPR001480 -
Aip10g00582 756 Pfam PAN-like domain 347 414 IPR003609 -
Aip10g00582 756 SMART ntp_6 349 428 IPR003609 -
Aip10g00582 756 CDD B_lectin 40 163 IPR001480 -
Aip10g00582 756 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Aip10g00582 756 Gene3D Transferase(Phosphotransferase) domain 1 588 742 - -
Aip10g00582 756 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 194 IPR036426 -
Aip10g00582 756 Gene3D Phosphorylase Kinase; domain 1 477 587 - -
Aip10g00582 756 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00582 Aip-Chr10 5959615 5962750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00582 428 729 Receptor kinase-like Gene Family AT4G05200 54.369 8.04e-101 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00582 PK_Tyr_Ser-Thr 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00582 - - adu:107468578 1465.67