Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00581 ATGCAGGTCAGCTTGTTCTGCTTCCTTGATGAACAATTCCATCAAGAAATTAACGAATTAGTCAACAACATTATCTTCTTCTATACTATCCTCCAAACGATCACGACAACAAACAAACCAAACCTTCGTGCTGGGCTTCTTCAGAGAGACAACCCTGTTGACAACTCTACCGGCTATCTCAAGATCGGAGAAAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTCCAGCTACTCGATACCGGTAACCTTGTTCTCAAAGATTCAGAGCAGAGCAATAACTACCTATGGCAGAGCTTCGATTACCCAACAGATACCTTGCTACCTGGGATGAAATTGGGTTGGAACTTTGACACAGGAGTTGAGAAGCACTTAACATCGTGGAAGGTCAAAGGTGAAGACCCTTCTTCCGGTGACTACACTTACAAGCTAGATTACCGCGGTTTACCTGAGATTTTTCTGAGGAGAAACCAGACTATCATATACCGAACTGGTCCTTGGAATGGTGAGAGATTTAGCGGGGTTCCAAACATGAACGCCGATACTCATTCCATTGTGTTCAGCTTCTCCGATGACGCGCACGGCGTGTTCTACTCTTTCTCCATCTGGAACGCTTCTTTGTTATCGAGGCTAACGGTGACCTCAGATTCAGACGGAGAACTTCAACGGCGGACGTGGATAGCGAGCAGCGAAACTTGGAACAATTTCTGGTACGCACCGGCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAATAATGCATCGCCGCTTTGCACATGTATGAAAGGGTTCAGTCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGATGGGTGTGTGAGGAAAACGGGTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGCACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGCTTGGCCAACTCATTGACATGAGAGTCTACGGTACGGATGGCCAAGATGTCTATGTCAGATTGGCAGCTACTGATATAGGATCTACTAGCTCCAACAAGAATCACAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTTCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACGAAAGGAACATGGATGATCTGAAATTGCCAATGTTTGATTTTGATACCCTAATGATGGCTACAAATAATTTCTCTGAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAAGGGTAGATTGATTGAAGGTCAAGAAATTGCTGTAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAATGAATTTAAAAATGAAATCAGATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAGAAGATGGTGGTCTATGAATATATGGAAAATAGGGGACTTGATTCCATTTTGTTTGACAAATCAAAAAATCTCTTGCTTAATTGGGAGAGGCGCTATAATATTATATATGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGATAAGCAATATATTACTAGATATTGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAGTTTTTGACAAAGATCAAATACAAGAAAAAACAGTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGATGGAAACTTTTCAATAAAATCTGATGTTTATAGCTTTGGAGTTATGGTATTGGAAATTATAACTGGAAAGAAAAATAGAAGATTTTCCAATGATAACGACGAATTCAATTTTCTGGAAAATGTTTGGAGACGTTGGCATGAAGGAACTATATTGACATTGGTTGATTCATCCATGGGCAATTCATATACAGAATCAGAAGTCTTAAGATGCATACATGTTGGTCTCTTATGTGTTCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCAGTGATTTTAATGTTAAGTAGTGAAGCTGCATTAATGCCACGTCCAAACAATCCTGGATTTTTTTTAAGAAGGAATCATGCAGAAACATCTTCAAGAAATCAAGATAAAACAGAGAGTGTAAATTTAGTTACTGTCACATTACTAAATGCTAGGTAG 2343 0.4003 MQVSLFCFLDEQFHQEINELVNNIIFFYTILQTITTTNKPNLRAGLLQRDNPVDNSTGYLKIGENGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSEQSNNYLWQSFDYPTDTLLPGMKLGWNFDTGVEKHLTSWKVKGEDPSSGDYTYKLDYRGLPEIFLRRNQTIIYRTGPWNGERFSGVPNMNADTHSIVFSFSDDAHGVFYSFSIWNASLLSRLTVTSDSDGELQRRTWIASSETWNNFWYAPADQCDHYRECGPYGVCDNNASPLCTCMKGFSPKNPQAWNLRDGSDGCVRKTGLNCSTDKFLHLEHMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLIDMRVYGTDGQDVYVRLAATDIGSTSSNKNHRAVLAIGITLSALVLVLGLVSICYLRKKRQQSSRGDERNMDDLKLPMFDFDTLMMATNNFSEDNKLGEGGFGSVYKGRLIEGQEIAVKRLSENSGQGINEFKNEIRLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMENRGLDSILFDKSKNLLLNWERRYNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDIEMNPKISDFGMARVFDKDQIQEKTVRVVGTYGYMSPEYIMDGNFSIKSDVYSFGVMVLEIITGKKNRRFSNDNDEFNFLENVWRRWHEGTILTLVDSSMGNSYTESEVLRCIHVGLLCVQECAEDRPTMSSVILMLSSEAALMPRPNNPGFFLRRNHAETSSRNQDKTESVNLVTVTLLNAR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00581 780 CDD STKc_IRAK 469 734 - -
Aip10g00581 780 ProSiteProfiles Protein kinase domain profile. 463 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00581 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Aip10g00581 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 46 184 IPR036426 -
Aip10g00581 780 ProSiteProfiles PAN/Apple domain profile. 310 390 IPR003609 -
Aip10g00581 780 PANTHER - 48 778 - -
Aip10g00581 780 ProSiteProfiles Bulb-type lectin domain profile. 1 114 IPR001480 -
Aip10g00581 780 Gene3D Hepatocyte Growth Factor 309 390 - -
Aip10g00581 780 SMART blect_4 25 118 IPR001480 -
Aip10g00581 780 Pfam S-locus glycoprotein domain 177 289 IPR000858 GO:0048544
Aip10g00581 780 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 48 778 - -
Aip10g00581 780 Pfam D-mannose binding lectin 48 144 IPR001480 -
Aip10g00581 780 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Aip10g00581 780 Gene3D - 22 115 IPR036426 -
Aip10g00581 780 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Aip10g00581 780 SMART serkin_6 463 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00581 780 SMART ntp_6 310 389 IPR003609 -
Aip10g00581 780 Pfam Domain of unknown function (DUF3403) 736 780 IPR021820 GO:0004674
Aip10g00581 780 ProSiteProfiles EGF-like domain profile. 255 291 IPR000742 -
Aip10g00581 780 Pfam PAN-like domain 310 375 IPR003609 -
Aip10g00581 780 SUPERFAMILY Protein kinase-like (PK-like) 448 761 IPR011009 -
Aip10g00581 780 CDD PAN_AP_plant 308 390 - -
Aip10g00581 780 Gene3D Phosphorylase Kinase; domain 1 424 538 - -
Aip10g00581 780 PIRSF SRK 46 780 IPR024171 GO:0004674
Aip10g00581 780 Pfam Protein tyrosine and serine/threonine kinase 466 731 IPR001245 GO:0004672|GO:0006468
Aip10g00581 780 CDD B_lectin 49 118 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00581 Aip-Chr10 5948809 5952125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00581 406 749 Receptor kinase-like Gene Family AT4G23230 53.890 2.60e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00581 PK_Tyr_Ser-Thr 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00581 - - aip:107621495 1217.99