Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00580 ATGAGAGTCTTCTTCACTCGCCTTAACTCCCTCATCATCATTCTTATTTGCTTCTTCTTCATCGCTCCATCAACCTCTTTCGATACTTTAACCGGAACACAAATCCTCACAACCAACCAAACCTTGTTGTCAGAAAATCAAACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAATCCCATTGACAACTCCAAAGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTTCTCAATTCATCCGGCAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTCCAGCTCCTGGAAACCGGTAACCTTGTTCTCAAAGACTCGGAACAGAGCAATAACTACCTATGGCAGAGCTTCGATTACCCAACAGATACCTTGCTACCTGGGATGAAGTTGGGTTGGAACTTCGACACAGGAATTGAGAAGCACTTAACATCGTGGAAGGTCACAGGTGAAGACCCTTCTTCCGGTGACTACACTTTCAAGCTAGATTACCGCGGTTTACCTGAGATTTTTCTGAGGACAAACCAGACTATCATATACCAAACTGGTCCTTGGAATGGTGAGAGATTCAGCGGGGTTCCAGAGATGGACACCGATACTCATTCCATTGTGTTCAGCTTCTCCGATGACGCGCACGGCGCGTTCTACTCTTTCTCCATCGGGAACGCTTCTTTGTTATCGAGGCTAACGGTGACGTCAGATTCAGACGGAGAACTTCAACGGCGGACGTGGATAGAGAGCAGCGAATCTTGGAACAAGTTCTGGTACAAACCGGCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAATAATGCATCGCCGGTTTGCACATGTATGAAAGGGTTCAGCCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGGCGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATAAATAAGAGTATGACACTTGATGAATGTGGCAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCGAACATTGATATCAGAAACGGAGGAAGTGGCTGTGTTATGTGGATTGGTCAACTCTTTGACATGAATGTCTACCATACAGATGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGTTCCAGCAAGAATCGTAGAGCTGTTCTAGCTACTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGAGTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACGAAAGGAACATGGAAGATCTGAAATTGCCAATGTTTGATTTTGATACCTTAACGATGGCTACAAATAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTATTGTTTATAGGGGTAGATTGATTGAAGGTCAAGAAATTGCTATAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAATGAATTTAAAAATGAAATCAAATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAGAAGATGGTGGTCTATGAATATATGGAAAATAGAGGACTTGATTCCATTTTGTTTGACAAATCAAAAAATCTCTTGCTTAATTGGGAGAAGCGTTTTAATATTATATGTGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGATAAGTAATATATTACTAGATATTGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGACAAAGATCAAACACAAGAAAATACAGTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGATGGAAATTTTTCAATAAAATCTGATGTTTATAGCTTTGGAGTTATGGTATTGGAAATTATAACTGGGAAGAAAAATAGAAGATTTTCCGGGGATAACGACGAATTAAATCTTCTGGAAAATGTTTGGAGGCGTTGGCATGAAGGAACTATATTGACATTGGTTGATTCATCCATTGGCAATTCATATGCAGAATCAGAAGTCTTAAGATGCATACATGTTGGTCTCTTATGTGTCCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCAGTGGTTTTAATGTTGAGTAGTGAAGCTGCATTAATGCCACGTCCTAGAAATCCTGGGTTTTTTCTAAGAAGGAATCATGAAGAAACATCCTCAAGAAATCAAGACAAAACAGAGAGTGTAAATCAAGTTACTGTCACATTACTAAATGCTAGGTAG 2439 0.4047 MRVFFTRLNSLIIILICFFFIAPSTSFDTLTGTQILTTNQTLLSENQTFVLGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIDNSKGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLETGNLVLKDSEQSNNYLWQSFDYPTDTLLPGMKLGWNFDTGIEKHLTSWKVTGEDPSSGDYTFKLDYRGLPEIFLRTNQTIIYQTGPWNGERFSGVPEMDTDTHSIVFSFSDDAHGAFYSFSIGNASLLSRLTVTSDSDGELQRRTWIESSESWNKFWYKPADQCDHYRECGPYGVCDNNASPVCTCMKGFSPKNPQAWNLRDGSGGCVRNTGLNCSTDKFLHLENMKLPETSSVFINKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWIGQLFDMNVYHTDGQDLYVRLAAADIGSTSSSKNRRAVLATGITLSALVLVLGVVAICYLRKKRQQSSRGDERNMEDLKLPMFDFDTLTMATNNFSQDNKLGEGGFGIVYRGRLIEGQEIAIKRLSENSGQGINEFKNEIKLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMENRGLDSILFDKSKNLLLNWEKRFNIICGIARGLLYLHQDSRFRIIHRDLKISNILLDIEMNPKISDFGMARIFDKDQTQENTVRIVGTYGYMSPEYIMDGNFSIKSDVYSFGVMVLEIITGKKNRRFSGDNDELNLLENVWRRWHEGTILTLVDSSIGNSYAESEVLRCIHVGLLCVQECAEDRPTMSSVVLMLSSEAALMPRPRNPGFFLRRNHEETSSRNQDKTESVNQVTVTLLNAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00580 812 CDD STKc_IRAK 501 766 - -
Aip10g00580 812 CDD B_lectin 33 150 IPR001480 -
Aip10g00580 812 Gene3D - 24 147 IPR036426 -
Aip10g00580 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 811 - -
Aip10g00580 812 Pfam PAN-like domain 342 407 IPR003609 -
Aip10g00580 812 SMART ntp_6 342 421 IPR003609 -
Aip10g00580 812 SUPERFAMILY Protein kinase-like (PK-like) 480 793 IPR011009 -
Aip10g00580 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Aip10g00580 812 Gene3D Transferase(Phosphotransferase) domain 1 571 773 - -
Aip10g00580 812 Gene3D Phosphorylase Kinase; domain 1 469 570 - -
Aip10g00580 812 Pfam Domain of unknown function (DUF3403) 768 812 IPR021820 GO:0004674
Aip10g00580 812 Gene3D Hepatocyte Growth Factor 340 422 - -
Aip10g00580 812 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Aip10g00580 812 Pfam Protein tyrosine and serine/threonine kinase 497 763 IPR001245 GO:0004672|GO:0006468
Aip10g00580 812 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00580 812 Pfam D-mannose binding lectin 74 176 IPR001480 -
Aip10g00580 812 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Aip10g00580 812 SMART blect_4 33 150 IPR001480 -
Aip10g00580 812 CDD PAN_AP_plant 340 422 - -
Aip10g00580 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 216 IPR036426 -
Aip10g00580 812 PANTHER - 12 811 - -
Aip10g00580 812 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Aip10g00580 812 Pfam S-locus glycoprotein domain 209 321 IPR000858 GO:0048544
Aip10g00580 812 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Aip10g00580 812 SMART serkin_6 495 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00580 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00580 Aip-Chr10 5920396 5923493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00580 451 812 Receptor kinase-like Gene Family AT4G23150 51.467 7.60e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00580 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00580 - - aip:107621495 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00580 10 5920396 5923493 Aip10g00580 10 5920396 5923493 ECH