Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00579 ATGAGAGTCTTCTTCACTCACCTTAACTCCCTCATCATCATTCTTATTTGCTTCTTCTTCATCGCTCCATCAACCTCTTTCGATACTTTAACCGGAACACAAATCCTCAAAACCAACCAAACCTTGTTGTCAGAAAACCAAACCTTCGTTCTAGGATTCTTCGGAGGTTCCAGCACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAATCCCATTGACAACTCCGCAGGCCATCTCAAGATCGGAGACAACGGAAACTTTATCCTTCTCAATTCATCGGGGAACCCGGCATGGTCCTCCAACCAAACCAACGCCAAGAATCCAGTTATCCAGCTCCTCGATACCGGCAACCTTGTTCTCAAAGATTTATCAGACACGACAAATAATAACTACTTGTGGCAGAGCTTCGAATACCCAACAGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTCGACACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGGGACTACACTATGAAGATAGATTACCATGGTTTACCTGAGGCCCTCCTCAGGAGAAACCAAACTATAATATACCGAACTGGTCCTTGGAACGGTGAGAGATTTAGTGGGATCCCAGGGATGAAAGACAACACCAATGATCTCAAGTACAATTTCTCTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGAACCTTCCTTGTTGTCGAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCTTACACACCAAAGGATCCATGCGATTACTATAGACAGTGTGGTCCGTATGGAGTGTGTGAGAATGATGCTTCCCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCCGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAACGTGTTTATAAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGAAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGTTTGACCAACTCTTTGACATGAATGTCCACCGTCCAGGCGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGATTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACGAAAGGAACATGGATGATCTAAAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGTAGATTGATTGAAGGTCAAGAAATTGCTGTAAAAAGTGGTTATATGTCTCCTGAATATATTATGGATGGAAACTTTTCAATAAAATCTGATATTTATAGCTTTGGAGTTATGATATTGGAAATTATAACTGGGAAGAAAAATAGAGGATTTTCTGGTGACAACGATGAATTGAATCTTTTGGAAAATGTAGGTTTGGAGGCGTTGGCACGAAGGAACTATATTGACATTGATTGA 1770 0.4203 MRVFFTHLNSLIIILICFFFIAPSTSFDTLTGTQILKTNQTLLSENQTFVLGFFGGSSTNYYLGIWYNNISPQTIVWVANRDNPIDNSAGHLKIGDNGNFILLNSSGNPAWSSNQTNAKNPVIQLLDTGNLVLKDLSDTTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTMKIDYHGLPEALLRRNQTIIYRTGPWNGERFSGIPGMKDNTNDLKYNFSYDEHGVWFSFSVTEPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYTPKDPCDYYRQCGPYGVCENDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLENMKLPETSNVFINKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWFDQLFDMNVHRPGGQDLYVRLAAADIGSTSSNKNHRAVLAIGITLSALVLVLGLIAICYLRKKRQQSSRGDERNMDDLKLPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKSGYMSPEYIMDGNFSIKSDIYSFGVMILEIITGKKNRGFSGDNDELNLLENVGLEALARRNYIDID 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00579 589 Pfam D-mannose binding lectin 74 178 IPR001480 -
Aip10g00579 589 Pfam PAN-like domain 342 407 IPR003609 -
Aip10g00579 589 Gene3D Phosphorylase Kinase; domain 1 469 528 - -
Aip10g00579 589 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Aip10g00579 589 SMART ntp_6 342 421 IPR003609 -
Aip10g00579 589 CDD PAN_AP_plant 338 422 - -
Aip10g00579 589 Gene3D Transferase(Phosphotransferase) domain 1 529 585 - -
Aip10g00579 589 SUPERFAMILY Protein kinase-like (PK-like) 524 560 IPR011009 -
Aip10g00579 589 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Aip10g00579 589 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Aip10g00579 589 SMART blect_4 33 152 IPR001480 -
Aip10g00579 589 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 218 IPR036426 -
Aip10g00579 589 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Aip10g00579 589 CDD B_lectin 33 152 IPR001480 -
Aip10g00579 589 SUPERFAMILY Protein kinase-like (PK-like) 478 523 IPR011009 -
Aip10g00579 589 Pfam Protein tyrosine and serine/threonine kinase 523 558 IPR001245 GO:0004672|GO:0006468
Aip10g00579 589 Gene3D Hepatocyte Growth Factor 337 419 - -
Aip10g00579 589 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 525 573 - -
Aip10g00579 589 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 523 - -
Aip10g00579 589 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Aip10g00579 589 CDD EGF_CA 289 321 - -
Aip10g00579 589 Gene3D - 24 149 IPR036426 -
Aip10g00579 589 PANTHER - 525 573 - -
Aip10g00579 589 PANTHER - 12 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00579 Aip-Chr10 5913376 5916215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00579 410 526 Receptor kinase-like Gene Family AT1G25390 30.233 2.16e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00579 S_locus_glycop 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00579 - - aip:107621495 913.294