Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00578 ATGAGTGCTTCTACAAATCTTAATGTCTATTTCTTCTGTGCCTTCATCTTCTCATTCAGTTCCTTTTTCAATATTGTAACCTCTGTGGATACCTTAACTGCAACACAGTCACTTGGGATCAACCAAACACTTGTATCCTCAAAGCAGGTGTTTGAGTTCGGCTTCTTCAATGGAACCAACAACTCCACATGGTACTTAGGAATATGGTACAAGGACATTCCTCAAAGAACAGTGGTTTGGGTTGCAAACCGAGACACCCCACTTAAGGATACCAATGGAACTCTCAAGATTGGAGCAAGGGGGAACCTTGTTCTTCTTGATCATGCAGGAAATGCTATTTGGTCCTCAAATGAAACCACTGCTACAAATCCAGTTCTTCAGCTTTTGGATACAGGAAACTTGATTCTCAGAGAAGCAAACAAAAATGGTGCAATTGATGGCAACTATCTATGGCAGAGCTTTGATTATCCAACAGATACTTTGTTACCGGGAATGAAGCTTGGTTGGAACTTGGACACTGGTATTGAGCTCTATATAACATCATGGAAGAGCCAAGATGACCCCTCAAGTGGTGATTTTTCTTTTAGGATGGAAAAACTTGGGCTACCAGAAATTTTTTTATGGAATAATCAAGTTAAGGTACATAGAAGTGGACCATGGAATGGAGTGAGATTCAGTGAAATACCAGTGGTTTCATCAAATGCTGTTCTTCAAGATAATATGTCTGTGGATTCACATGAAGTGTACTACATACTTTCAGCTATCAATCAGTCCAAGTTTTCAAGAAAAACTGTGAGCTGGAATGGCGAAATTCAACGTCTTGTGTGGGTGGAAAGTAGCCAAAGCTGGAAGAAGCTATGGTTTGCACCAAGTGGTGAATGTGACAAGTATGGTATCTGTGGTCCATATGGTATCTGTGACTCCAATGCTTTCCCAGTATGCAGTTGTATTCAAGGCTTCAGTGTCAAGAACCAGACAGAGTGGGATTTCAGGGATTTTTCTAATGGTTGTGTAAGAAAGACAAGATTGGATTGTGGGAGAGACAAGTTTCTGAAGCTGCAACATGTGGAACCACCAGAAACAACAAGAGTGTTTGTGAACAGAAGCATGACTCTTCAAGAATGTGAAGCTATGTGCTTGAAAAATTGCTCTTGCACTGCCTATGCTAATGTTGAGATCACAGATGGAGGAACTGGTTGTGTGATGTGGAGTGATGAACTCTTAGACACGAGGATGTTTTCTGTTGCTGGCCAAGATCTCTTTATCAGATTAGCATCTTCTGATGTAGTTGACATAAACAATGGATCTGGTGGTAGCTCAGGAAAGAACAATAATGTAGGCAAAATAGTAGGCATTACATTTGGTGCTGTTGCTAGTGTAATTTTGGGCTTGAGCTTGTTTCTTTTATGGAAGAAGAGAAAATTGAAAAGTATATGGCAAAGGAAAACCAATCAGAAAGGTTCCTATGAGAGACCTCAGCGCATTGAGAGAGTAATTTCAGCTAGCAGAGAACTCTCAGGTGAACGCACCATGGATGACTTAGAGTTGCCATTGTTTGATTTCACAACACTAACAATGGCCACTAACAACTTCTCTGAAGGAAATAAGCTCGGAGAAGGTGGTTTTGGAAGTGTTTACAGGGGTAGGTTGGTTGAAGGACTAGAGATTGCTGTGAAAAGGTTGTCCAAAAGCTCTGGCCAAGGAAATGAAGAATTCAAGAATGAGGTCAAGTCAATGGCAAAGCTTCAACACAGAAATCTTGTAAGATTGTTTGGTTGCTGCATTGAAAAGGAGGAGCAGATGTTGGTTTATGAATACATGGAAAACAACAGCCTTGAATCTATTTTATTTGACAAAGACAAATGTTGTTTGCTTGACTGGCAAATGCGATTCGATATTATATGTGGAATATCTAGAGGACTTCTTTATCTTCACCAAGACTCCAGACTTAGAATTATCCACAGGGATCTCAAGGCAAGTAATATTCTGCTGGATAGAGAAATGAACCCAAAGATATCGGATTTTGGAATGGCTAGAATTTTCTGCAGCGATCAAACTCAAGCAAACACAAGGAGAGTTGTTGGAACATATGGCTATATGTCGCCAGAATATGCAATGGACGGACTCTTCTCAGTTAAGTCTGATGTTTTCAGTTTTGGCGTTCTTGTGCTAGAGATCATAAGCGGCAAAAAGAACAAAGGATTTTATTCCTCAGAAGAGATAAATCTTCTGGGACATGTAAGAGAAAAGCCACATTCCCTAGAGACTGGAGTGTTACTGTTATATATTATCTTGTAA 2298 0.4008 MSASTNLNVYFFCAFIFSFSSFFNIVTSVDTLTATQSLGINQTLVSSKQVFEFGFFNGTNNSTWYLGIWYKDIPQRTVVWVANRDTPLKDTNGTLKIGARGNLVLLDHAGNAIWSSNETTATNPVLQLLDTGNLILREANKNGAIDGNYLWQSFDYPTDTLLPGMKLGWNLDTGIELYITSWKSQDDPSSGDFSFRMEKLGLPEIFLWNNQVKVHRSGPWNGVRFSEIPVVSSNAVLQDNMSVDSHEVYYILSAINQSKFSRKTVSWNGEIQRLVWVESSQSWKKLWFAPSGECDKYGICGPYGICDSNAFPVCSCIQGFSVKNQTEWDFRDFSNGCVRKTRLDCGRDKFLKLQHVEPPETTRVFVNRSMTLQECEAMCLKNCSCTAYANVEITDGGTGCVMWSDELLDTRMFSVAGQDLFIRLASSDVVDINNGSGGSSGKNNNVGKIVGITFGAVASVILGLSLFLLWKKRKLKSIWQRKTNQKGSYERPQRIERVISASRELSGERTMDDLELPLFDFTTLTMATNNFSEGNKLGEGGFGSVYRGRLVEGLEIAVKRLSKSSGQGNEEFKNEVKSMAKLQHRNLVRLFGCCIEKEEQMLVYEYMENNSLESILFDKDKCCLLDWQMRFDIICGISRGLLYLHQDSRLRIIHRDLKASNILLDREMNPKISDFGMARIFCSDQTQANTRRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIISGKKNKGFYSSEEINLLGHVREKPHSLETGVLLLYIIL 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00578 765 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Aip10g00578 765 Pfam S-locus glycoprotein domain 216 323 IPR000858 GO:0048544
Aip10g00578 765 Pfam Protein tyrosine and serine/threonine kinase 534 732 IPR001245 GO:0004672|GO:0006468
Aip10g00578 765 Gene3D Transferase(Phosphotransferase) domain 1 607 758 - -
Aip10g00578 765 SMART serkin_6 531 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00578 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Aip10g00578 765 ProSiteProfiles Protein kinase domain profile. 531 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00578 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 188 IPR036426 -
Aip10g00578 765 SUPERFAMILY Protein kinase-like (PK-like) 510 732 IPR011009 -
Aip10g00578 765 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Aip10g00578 765 Pfam D-mannose binding lectin 77 183 IPR001480 -
Aip10g00578 765 Gene3D Phosphorylase Kinase; domain 1 507 606 - -
Aip10g00578 765 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Aip10g00578 765 CDD PAN_AP_plant 341 425 - -
Aip10g00578 765 SMART blect_4 35 157 IPR001480 -
Aip10g00578 765 SMART ntp_6 345 424 IPR003609 -
Aip10g00578 765 CDD B_lectin 35 157 IPR001480 -
Aip10g00578 765 PANTHER - 17 747 - -
Aip10g00578 765 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 747 - -
Aip10g00578 765 Gene3D - 24 154 IPR036426 -
Aip10g00578 765 PIRSF SRK 1 758 IPR024171 GO:0004674
Aip10g00578 765 Pfam PAN-like domain 345 410 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00578 Aip-Chr10 5887782 5890825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00578 433 747 Receptor kinase-like Gene Family AT4G23190 54.114 1.07e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00578 PK_Tyr_Ser-Thr 8.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00578 - - aip:107621503 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00578 10 5887782 5890825 Aip10g00578 10 5887782 5890825 ECH