Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00576 ATGAGAATCTTCTTCACTCATCTTATTGACTACATCATCATTGTTATTGGTTTCTTCTTCATCACTCCATCAACCTCTTTCGATACTTTAACCGGAACACAAATCCTCAGAACCAACCAAACGCTATTGTCACAAAACCAATCCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGGGACAACCCTATTGAAACCTCCACAGGCTATCTCAAGATTGGAGACAATGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCCACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGAGTACCCAACGGATACCTTGTTACCAGGGATGAAGGTCGGTTGGAACTTGGACACAGGAACAGAGAAGCACTTAACATCATGGAAGGTCACAGGTGAAGACCCTTCAAGCGGGGACTACACTTTGAAGATAGATTACCATGGTTTATATGAGACTCTCCTCAGGAGAAACCAAACTATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGAACCCGGCGATGAAAGACAACACCGATGGTCTCAAGTTCAATTTCACTTATGATGATCATGGTGCGTGGTACTCTTTTTCCGTTACAAGACCTTCCTTGTCGAGGATAATTGTGACATCTGATTCTGATGGCGAGTTTCAACGCTACCTGTGGATACAAGGAAGATGGAACAAGTTCTGGTACAAACCGTCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAATAATGCATCGCCGGTTTGCACATGTATGAAAGGGTTCAGCCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGATTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACTAGCAGCGTGTTTATAAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCACAAACGGAGGAAGTGGCTGTATTATGTGGATTGGTCAACTCTTTGACATGAGTGTCTACCGTACGGATGGCCAAGATCTCTATGTCAGATTGGCTGCAGCTGATATAGGATCTACTAACTCCAACAAGAATCATAGAGTAGTACAGGCTATTAGCATCACACTTACTGCACTTGTTTTAGTTTTTGGATTGGTTGCTATTTGTTACTTATGGAAGAAGGGAAAACAAAGATCTAGAGCTGCTATTTCAGGTTTTGTCCACAGAAATCATGATTGGTTAATGAATGAGGTGGTGCCTTCTAGAAGATACTTGGGTGATGAAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTGATACCTTAATGATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGCCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGATTTTTGCTTGACTGGGAAAGGCGTTTTAATATCATATATGGAATAGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAACATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGATGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAACAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGACCCATCAATCTGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTGCCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAACACTGAGTCATCTTCAAGTAAGAATGATGAAACATGGAGCGTAAATCAAGTTACAGTCACAACGTTAGATGCTAGGTAG 2520 0.3984 MRIFFTHLIDYIIIVIGFFFITPSTSFDTLTGTQILRTNQTLLSQNQSFVLGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIETSTGYLKIGDNGNFVLLNSSGNPAWSSNQTHAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVTGEDPSSGDYTLKIDYHGLYETLLRRNQTIICRSGPWNGERFSGNPAMKDNTDGLKFNFTYDDHGAWYSFSVTRPSLSRIIVTSDSDGEFQRYLWIQGRWNKFWYKPSDQCDHYRECGPYGVCDNNASPVCTCMKGFSPKNPQAWNLRDGSDGCVRNTDLNCSTDKFLHLENMKLPETSSVFINKSMTLDECGSLCKRNCSCTAYANIDITNGGSGCIMWIGQLFDMSVYRTDGQDLYVRLAAADIGSTNSNKNHRVVQAISITLTALVLVFGLVAICYLWKKGKQRSRAAISGFVHRNHDWLMNEVVPSRRYLGDERNMDDLELPMFDFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIAKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRFLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLLDPSICNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPNTESSSSKNDETWSVNQVTVTTLDAR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00576 839 MobiDBLite consensus disorder prediction 796 839 - -
Aip10g00576 839 SMART blect_4 33 152 IPR001480 -
Aip10g00576 839 Gene3D Phosphorylase Kinase; domain 1 494 594 - -
Aip10g00576 839 Pfam Protein tyrosine and serine/threonine kinase 521 788 IPR001245 GO:0004672|GO:0006468
Aip10g00576 839 Pfam PAN-like domain 341 406 IPR003609 -
Aip10g00576 839 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Aip10g00576 839 SUPERFAMILY Protein kinase-like (PK-like) 503 791 IPR011009 -
Aip10g00576 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 838 - -
Aip10g00576 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Aip10g00576 839 Gene3D Hepatocyte Growth Factor 338 421 - -
Aip10g00576 839 CDD STKc_IRAK 525 791 - -
Aip10g00576 839 ProSiteProfiles Protein kinase domain profile. 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00576 839 Pfam Domain of unknown function (DUF3403) 793 839 IPR021820 GO:0004674
Aip10g00576 839 SMART serkin_6 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00576 839 Gene3D - 23 149 IPR036426 -
Aip10g00576 839 Pfam Receptor serine/threonine kinase 476 509 IPR022126 GO:0004674
Aip10g00576 839 Pfam D-mannose binding lectin 74 178 IPR001480 -
Aip10g00576 839 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Aip10g00576 839 PANTHER - 13 838 - -
Aip10g00576 839 ProSiteProfiles PAN/Apple domain profile. 341 421 IPR003609 -
Aip10g00576 839 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Aip10g00576 839 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Aip10g00576 839 SMART ntp_6 341 420 IPR003609 -
Aip10g00576 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Aip10g00576 839 CDD B_lectin 33 152 IPR001480 -
Aip10g00576 839 CDD PAN_AP_plant 337 421 - -
Aip10g00576 839 PIRSF SRK 1 839 IPR024171 GO:0004674
Aip10g00576 839 Gene3D Transferase(Phosphotransferase) domain 1 595 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00576 Aip-Chr10 5782726 5793812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00576 436 838 Receptor kinase-like Gene Family AT4G05200 49.383 4.69e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00576 PK_Tyr_Ser-Thr 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00576 - - aip:107621495 1357.81