Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00574 ATGAGGAGAATCTTCTTCCCACACCTTAACTACCTCATCATCATTCTTATTAGCTTCTTCTTCATCACTCTATCGACCTCCTCGGATACTTTAACCGGCACACAAATCCTCACAACCAACCAAACCCTGTTGTCACAAAACCAAACCTTTGTGCTGGGCTTCTTCAGAGGTTCCGACACCAACTATTACCTTGGAATATGGTATAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAACCCCATTGATAACTCCACAGGCTATCTTATGATTGGAGACAATGGAAACCTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACTGGTAACCTTGTTCTCAAAGATTCATCAGACAAGATCAGTAGTAGCTACTTATGGCAGAGCTTCGATTACCCAACAGATACCTTGTTACCGGGGCTGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAAGTCAAAGGTGAGGACCCTTCAAGCGGTGACTACACTATGAAGGTAGATTACCATGGTTTACCTGAGATTCTCCTCAACAAAAACCAAACAATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAATGGGCACCCGGCGATGAAAGACAACACCTATGGTCTCAAGTTCAATTTCACTTATGATGAGCATAGTGTGTTTTTCTCTTTTTCCATTACAAAATCTTCCTTGTTGTCTAGAACAATTGTGACATCTGATTCTGATGGTGAGCTTCAACGCTACATGTGGATACAAGGAAGTTGGAACCAGTTCTGGTACCTACCAGCGGATCAATGCGATTACTATGGACAGTGTGGTCCGTACGGAGTGTGTGACAAAGATGCTTCGCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAGGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACTGGTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCTACATCACAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGCCAACTCTTTGACATGAGCGTCTACCGTAAGGATGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTCCAGGCTGTTGGCATCACACTTATTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGCGGTGGTGTTTTCTAGAAAACACTTAGGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGAGGAAGATTGATTGAAGGCCAAGAGATTGCTGTGAAGAGATTATCAAAGAATTCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTATTTGACAAATCGAAAAAACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATATATGGGATAGCCAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATGGCTAGAATTTTTGACAAAGATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATCGAAAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGGCATTGGCATAAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATATGCAAAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGCCTTCAGTGGTCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTACGCAAGGACAAATGATCCAGAGATTGATTCATCTTCAAACAAGCAAAATGAAATATGGAGTGTGAATCAAGTCACAATCACAATGTTAGATGCTAGGTAG 2502 0.4005 MRRIFFPHLNYLIIILISFFFITLSTSSDTLTGTQILTTNQTLLSQNQTFVLGFFRGSDTNYYLGIWYNNINPQTIVWVANRDNPIDNSTGYLMIGDNGNLVLLNSSGNPAWSSNQTNAKNPVLQLLDTGNLVLKDSSDKISSSYLWQSFDYPTDTLLPGLKIGWNLDTGTEKHLTSWKVKGEDPSSGDYTMKVDYHGLPEILLNKNQTIICRSGPWNGERFNGHPAMKDNTYGLKFNFTYDEHSVFFSFSITKSSLLSRTIVTSDSDGELQRYMWIQGSWNQFWYLPADQCDYYGQCGPYGVCDKDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIYITNGGSGCVMWLGQLFDMSVYRKDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLILVLGLVAICYLMKKSKQRSRGFVRRSHDWIMNAVVFSRKHLGDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSKNSGQGNEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKMLVYEYMENRGLDSILFDKSKKPLLDWERRFNIIYGIAKGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFDKDQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNRKFYSDNNELNLLGNVWRHWHKGTALTLIDPSIGNSYAKSKVMRCIHISLLCVQERAEDRPTMPSVVLMLSSEAPSMPKPKIPGFYARTNDPEIDSSSNKQNEIWSVNQVTITMLDAR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00574 833 CDD B_lectin 34 153 IPR001480 -
Aip10g00574 833 CDD STKc_IRAK 520 785 - -
Aip10g00574 833 Gene3D Hepatocyte Growth Factor 341 423 - -
Aip10g00574 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 218 IPR036426 -
Aip10g00574 833 Gene3D Phosphorylase Kinase; domain 1 489 589 - -
Aip10g00574 833 Gene3D Transferase(Phosphotransferase) domain 1 590 794 - -
Aip10g00574 833 SMART serkin_6 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00574 833 Pfam PAN-like domain 343 408 IPR003609 -
Aip10g00574 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Aip10g00574 833 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 832 - -
Aip10g00574 833 Pfam Domain of unknown function (DUF3403) 787 833 IPR021820 GO:0004674
Aip10g00574 833 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Aip10g00574 833 Pfam Receptor serine/threonine kinase 471 504 IPR022126 GO:0004674
Aip10g00574 833 SMART blect_4 34 153 IPR001480 -
Aip10g00574 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Aip10g00574 833 CDD PAN_AP_plant 341 423 - -
Aip10g00574 833 Pfam Protein tyrosine and serine/threonine kinase 516 782 IPR001245 GO:0004672|GO:0006468
Aip10g00574 833 ProSiteProfiles Protein kinase domain profile. 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00574 833 SUPERFAMILY Protein kinase-like (PK-like) 499 813 IPR011009 -
Aip10g00574 833 Pfam D-mannose binding lectin 75 179 IPR001480 -
Aip10g00574 833 Gene3D - 23 150 IPR036426 -
Aip10g00574 833 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Aip10g00574 833 PANTHER - 12 832 - -
Aip10g00574 833 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Aip10g00574 833 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Aip10g00574 833 SMART ntp_6 343 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00574 Aip-Chr10 5773931 5777540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00574 502 833 Receptor kinase-like Gene Family AT4G11530 58.457 2.47e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00574 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00574 - - aip:107621495 1303.12