Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00573 ATGAGAATCTTCTTCACTCACCTTAACTCCCTCATCATCCTTGTTATTAGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGGACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCGAACAATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCCATCTCAAGATTGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAAACCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTTCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATGAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAAACAACATCGACGGTCTCAAGTTCAATTTCACTTATGATGAGCACAGTGTGTGGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTGTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTACGGAGTGTGTGACGAGAATGCTTCATCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTGCCGGAGACAAGCAGTGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCATTGACACGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGCAGTTCTGGATATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGAAAACAAAGATCTATAGGTATTGTCCACAGAAATCATGATTGGTTAACGAATGAGGTGGTGCCTTCTAGAAGATACTTGGGTGATGAAAGGAACATGGATGGTCTAGAGTTGCCAATGTTTGATTTTGATACCTTAATGATGGCTACAAATAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGCAGATTGATTAAAGGTCAAGAAATTGCTGTGAAGAGGTTATCAGAAGATTCTGGACAAGGAATTGAAGAGTTTAAGAATGAAGTCAAGTTAATTGTCAAGCTCCAACACCGAAATCTTGTGCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAAAAAATATTGGTGTATGAGTATATGAAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAATCAAAAAGAACCTTACTTGACTGGGAAAGGCGTTACAATATTATATATGGGATGGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAATATATTATTAGATAATGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTCGGCAAAGATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAATTTCTCAATAAAATCCGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATCGTAACTGGGAAGAAGAATAGAGAGTTTTATAGTGAGAATGATGAATTGAATCTTCTGGGAAATGTATGGAAGCACTGGCATGAAGGAACTGCATTGTCACTTCTTGATCCATCTATTGACAATTTATACACAGAAGCTGAAGTTGTAAAATGCATACATATTGGTCTCTTATGCGTCCAAGAACATGCAGAAGATAGGCCAACAATGTCTTCAGTGGTCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAATCCTAAAAATCCGGGATTTTCAACATGGAAAAAACATCTACAGATTGATTCATCGTCAAATAAACAAGATGAAACATGGAGTGTGAATCAAGTCACAATCACAATGTTAGATGCTAGGTAA 2511 0.4018 MRIFFTHLNSLIILVISFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFVLGFFRGSNTNYYLGIWYNNINPRTIVWVANRDNPVDNSTGHLKIGDNGNFVLLNSSGKPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTMKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKNNIDGLKFNFTYDEHSVWYSFSITEPSLLPRIIVTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASSICKCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLEHTKLPETSSVFVNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLIDTRVYSTDGQDLYVRLAAADIGSTSSNKNHRAVLDIGITLSALVLVLGLVAICYLRKKRKQRSIGIVHRNHDWLTNEVVPSRRYLGDERNMDGLELPMFDFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIKGQEIAVKRLSEDSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKILVYEYMKNRSLDSILFDKSKRTLLDWERRYNIIYGMARGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFGKDQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIVTGKKNREFYSENDELNLLGNVWKHWHEGTALSLLDPSIDNLYTEAEVVKCIHIGLLCVQEHAEDRPTMSSVVLMLSSEAPSMPNPKNPGFSTWKKHLQIDSSSNKQDETWSVNQVTITMLDAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00573 836 CDD B_lectin 34 153 IPR001480 -
Aip10g00573 836 Pfam Protein tyrosine and serine/threonine kinase 519 786 IPR001245 GO:0004672|GO:0006468
Aip10g00573 836 Gene3D Transferase(Phosphotransferase) domain 1 593 798 - -
Aip10g00573 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 835 - -
Aip10g00573 836 SMART blect_4 34 153 IPR001480 -
Aip10g00573 836 Pfam Receptor serine/threonine kinase 472 507 IPR022126 GO:0004674
Aip10g00573 836 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Aip10g00573 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Aip10g00573 836 Pfam D-mannose binding lectin 75 179 IPR001480 -
Aip10g00573 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Aip10g00573 836 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Aip10g00573 836 Gene3D Phosphorylase Kinase; domain 1 493 592 - -
Aip10g00573 836 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Aip10g00573 836 CDD PAN_AP_plant 339 423 - -
Aip10g00573 836 Gene3D - 24 150 IPR036426 -
Aip10g00573 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 218 IPR036426 -
Aip10g00573 836 SMART ntp_6 343 422 IPR003609 -
Aip10g00573 836 PANTHER - 13 835 - -
Aip10g00573 836 Pfam PAN-like domain 343 408 IPR003609 -
Aip10g00573 836 CDD STKc_IRAK 523 788 - -
Aip10g00573 836 Gene3D Hepatocyte Growth Factor 338 423 - -
Aip10g00573 836 Pfam Domain of unknown function (DUF3403) 790 836 IPR021820 GO:0004674
Aip10g00573 836 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Aip10g00573 836 SMART serkin_6 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00573 836 ProSiteProfiles Protein kinase domain profile. 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00573 836 SUPERFAMILY Protein kinase-like (PK-like) 502 814 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00573 Aip-Chr10 5764689 5767941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00573 505 836 Receptor kinase-like Gene Family AT4G11530 57.270 1.13e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00573 PK_Tyr_Ser-Thr 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00573 - - aip:107621495 1390.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00573 10 5764689 5767941 Aip10g00573 10 5764689 5767941 ECH