Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00568 ATGATGTTACTTCACTTCATCAAAGGTGACATACACATACCAGTTTTGCTGCTACTAACACTTAGCTTCTGCCATGTTGCAAATTCCTTATTAGACACCATAACCTCCTCTAATTACATCCTTAAGGACCCCGAAACCTTAATCTCCACCAACACTTTGTTCCATCTAGGATTCTTCACTCCTTCTAACTCATCAACCTTGTCCTACCTCGGAATTTGGTACATGTCCAAATCCTCTGTGGTCTGGGTTGCCAACAGAAACCAACCTATAAAGGATTCTTCTTCAGGGCATCTCAAAATATCTGAGGATGGAAACCTTTATGTCATGAACCAACAGAAGCAGATTCTTTGGTCATCAAACATCACAAATATTACATCCAACACAACGGCACAGCTTCAGAACACCGGAAACCTTGTGTTGCAAGAAATCACCACAGGAAGGATCCTTTGGCAGAGTTTCCAGCACCCTGCAGATACTTTCTTGCCGAAAATGGAGCTTAGCACCAATGAGATTACCGGCCAGAGAGTGAAACTCACCTCATGGAGAACTCCTAATGATCCATCCAAAGGAGACTTCACTATGAGTCTTGAACCCCTTCACATCGCTCAAGTGTTCATATGGAGAGGAACTCAACCTTATTGGAGAAGCGGTCCATGGAACGGTCAAGTTTTTATTGGGATACCTACTATGAACGCGAACTATCTTGACGGGTTCTCCTTAGATGGTGAAGGTGAAACCAACGGCACTTACTACCTCTCATACAACTATGCGAATGTGTCAATGATGTATGTGTTGAGTTCTGATGGAAACCTTCATGAAACCTATTGGGATTATGCAAAGAGAGATTGGATTGTGGACTGGTCTGCTGTAAGCTCTGTGTGTGATTTTTATGGAGAGTGTGGTCCCTTTGGAAGCTGTGATCCTAAAAATTCACCTATCTGCAGCTGTTTGAGAGGGTTTGAGCCAAAGAATGCTCAAGAGTGGAATAAACAAAACTGGAGCAGCGGTTGTGTGAGGAAGAAGCCTCTGCAGTGTGATGAGAGAGTCAGAAATAATAGGAGTAGTGATGGGTTTGTGAAGCTGCAAAATGTCAAGGTTCCAGATTTTTCACAGTGGTTGTCTTCCATTGCTTATGATTGCAGAACTGAGTGCTTGGCAAATTGCTCTTGCATTGCATACGCTTATGATTCTGGCATTGGCTGCATGTTATGGTGTGGAAACTTGATTGACATACAGCAGTTCTCAATGGGAGGAATTGATCTTTACATTCGAGTTCCCTCTTCGGAACTTGAGAAGAAAAATCACACACTGATCATAGTTCTTTCGGTCATAATAGCAATGGCTCTTATTGTGGCTTGTGCATATATCTTGAGGAAAAGGGCAATCAGAGGAGGTAACTACAATTCATACAATATAATTCAGAGAAGAAGTTATGTTAATGATACAAGTCAAGTTGAACTTCCGGAGAATTCACTATTTGAGCTTGAAAAGCTTGCTACTGCAACAAACAACTTCCACTCCAATAATAAGCTAGGACAAGGTGGTTTTGGATCTGTATATAAGGGTAGATTGGAAGATGGACAGGAGATAGCAGTTAAAAGACTTTCAAAAACATCTGGACAAGGTGTAGAAGAATTTATGAATGAAGTTATGGTAATATCAAAACTTCAACATCGAAATCTTGTCAGCCTTCTTGGATGTTGCATCGAAAGAGATGAAAAGATTTTGATCTATGAATACCTACCAAACAGAAGTTTGGATGCACATATATTTGATCCGCCTAAACAAAAGGTATTAAATTGGGAAAAACGTTTTAACATACTTGAAGGAATCGCTCGAGGTCTACTTTATCTTCACAGAGATTCTAGATTAAAGATTATACACAGAGACTTGAAATTAAGTAATATATTGTTAGATGACGAGTTAAATCCGAAAATATCAGATTTTGGTATGGCAAAAATTTTTGAGAATGCTGAAAATGAGGCCAATACTAGAAGAATTGTTGGAACATTTGGTTATATATCACCAGAATATGCTCTACAAGGACTATTTTCAGAAAAATCAGACGTATTTAGTTTCGGTGTTTTACTTTTGGAGATTATTAGTGGCAGAAAAAATAGCAGCTTTTATGAGAATGTTGAATCTTTGAGCCTTTTGGGGTTTGCATGGAAATTGTGGAGAAATGACAACATAGCATCACTAATAGATCCAGAAATATCAAATCCAAGCAATAAAAAAGACATAACGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGCTATAGGCCTACTATGACTGCAGTAATTTCGATGCTTAATAGTGAGACTGTTAATCTTCCTCCTCCCAAACAGCCAGCATTCATTCAAATACAGACAATGATAGATGTAGAGTCTTCTCTTAGAAATGATGGAGCATGTTCCATCAATTACATGAGTCTAACAAACATCCAAGGAAGATAA 2472 0.3904 MMLLHFIKGDIHIPVLLLLTLSFCHVANSLLDTITSSNYILKDPETLISTNTLFHLGFFTPSNSSTLSYLGIWYMSKSSVVWVANRNQPIKDSSSGHLKISEDGNLYVMNQQKQILWSSNITNITSNTTAQLQNTGNLVLQEITTGRILWQSFQHPADTFLPKMELSTNEITGQRVKLTSWRTPNDPSKGDFTMSLEPLHIAQVFIWRGTQPYWRSGPWNGQVFIGIPTMNANYLDGFSLDGEGETNGTYYLSYNYANVSMMYVLSSDGNLHETYWDYAKRDWIVDWSAVSSVCDFYGECGPFGSCDPKNSPICSCLRGFEPKNAQEWNKQNWSSGCVRKKPLQCDERVRNNRSSDGFVKLQNVKVPDFSQWLSSIAYDCRTECLANCSCIAYAYDSGIGCMLWCGNLIDIQQFSMGGIDLYIRVPSSELEKKNHTLIIVLSVIIAMALIVACAYILRKRAIRGGNYNSYNIIQRRSYVNDTSQVELPENSLFELEKLATATNNFHSNNKLGQGGFGSVYKGRLEDGQEIAVKRLSKTSGQGVEEFMNEVMVISKLQHRNLVSLLGCCIERDEKILIYEYLPNRSLDAHIFDPPKQKVLNWEKRFNILEGIARGLLYLHRDSRLKIIHRDLKLSNILLDDELNPKISDFGMAKIFENAENEANTRRIVGTFGYISPEYALQGLFSEKSDVFSFGVLLLEIISGRKNSSFYENVESLSLLGFAWKLWRNDNIASLIDPEISNPSNKKDITRCIHIGLLCVQELASYRPTMTAVISMLNSETVNLPPPKQPAFIQIQTMIDVESSLRNDGACSINYMSLTNIQGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00568 823 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Aip10g00568 823 PIRSF SRK 6 823 IPR024171 GO:0004674
Aip10g00568 823 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Aip10g00568 823 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Aip10g00568 823 PANTHER - 16 813 - -
Aip10g00568 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 221 IPR036426 -
Aip10g00568 823 Pfam Protein tyrosine and serine/threonine kinase 507 776 IPR001245 GO:0004672|GO:0006468
Aip10g00568 823 Pfam D-mannose binding lectin 80 182 IPR001480 -
Aip10g00568 823 CDD PAN_AP_plant 342 426 - -
Aip10g00568 823 CDD STKc_IRAK 511 777 - -
Aip10g00568 823 Pfam Domain of unknown function (DUF3403) 778 823 IPR021820 GO:0004674
Aip10g00568 823 Gene3D Phosphorylase Kinase; domain 1 468 580 - -
Aip10g00568 823 Pfam PAN-like domain 353 411 IPR003609 -
Aip10g00568 823 CDD B_lectin 38 156 IPR001480 -
Aip10g00568 823 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Aip10g00568 823 SMART blect_4 38 156 IPR001480 -
Aip10g00568 823 SMART ntp_6 353 425 IPR003609 -
Aip10g00568 823 Gene3D - 26 154 IPR036426 -
Aip10g00568 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Aip10g00568 823 SMART serkin_6 505 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00568 823 ProSiteProfiles Protein kinase domain profile. 505 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00568 823 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Aip10g00568 823 SUPERFAMILY Protein kinase-like (PK-like) 491 804 IPR011009 -
Aip10g00568 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 16 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00568 Aip-Chr10 5712164 5715219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00568 474 791 Receptor kinase-like Gene Family AT4G11530 57.276 5.85e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00568 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00568 - - adu:107468469 1107.82