Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00563 ATGTTCTTGTCACTATATGGTCACTGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAACATTAAATTAGGAGAGATCATTCCGGCCGATGCTTGTCTTCTCGAGGGCGACCCTCTAAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTATTTACTAGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCACACATTCTTAAGTAAAGCGGCTCATTTGGTGGATACGCTAACCAAGTTGGACACTTCTAGAAAGTGCTTACAGCAATTGGATGCTATAGATGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGCTCAAGCCAGAATCAGGGAGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGACTGCTCTAACTTACATTGATTCTGATGAAAATTGGCACCGTGTGAGCAAAGTGGCTTCGGCAAAAGGTAAAAACCTGTTTAATTGGCACCTTCTTATGATGGTTATAAGGATGACAGAGGGAGCAGcccaaaatgagccatga 585 0.4205 MFLSLYGHWSEQDAAILVPGDIINIKLGEIIPADACLLEGDPLSVDQSALTGESLLVTKNPTDEVFTRSTVKKGEIEAVVIATGVHTFLSKAAHLVDTLTKLDTSRKCLQQLDAIDAAIVGMLADPKEAQARIREVHFLPFNPVDKRTALTYIDSDENWHRVSKVASAKGKNLFNWHLLMMVIRMTEGAAQNEP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00563 194 PANTHER PLASMA MEMBRANE ATPASE 7 109 - -
Aip10g00563 194 PANTHER PLASMA MEMBRANE ATPASE 111 176 - -
Aip10g00563 194 PANTHER CALCIUM-TRANSPORTING ATPASE 111 176 - -
Aip10g00563 194 PANTHER CALCIUM-TRANSPORTING ATPASE 7 109 - -
Aip10g00563 194 Gene3D - 4 94 - -
Aip10g00563 194 Gene3D - 95 175 IPR023299 GO:0000166
Aip10g00563 194 Pfam E1-E2 ATPase 7 100 - -
Aip10g00563 194 SUPERFAMILY Calcium ATPase, transduction domain A 7 96 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00563 Aip-Chr10 5657767 5659601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00563 109 166 Primary Pumps ATPases AT4G30190 81.034 8.91e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00563 K01535 - csin:114262980 158.303