LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g00531	ATGCAAACGACGTACTTGGAGAGATCAAGGGAGAAGCGAAGTTTGGATTCAACCTCCGCTGATGAAGATGAACCTCAAAAGAAGAGACCTGCGTTGGCCAGTGTAATTGTTGAAGCCCTGAAGGTGGACTGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATCCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAACTAGGCACTGCCAAGCTTAGTGGGAGGACTTCTCCTAAGCAAATAGAAGGTCATGATGTTGGCAATTTACAATTACAATTCAAGACCAGGTTATCTCTTCCTCTCTTTACCGGTGGGAAAGTGGAGGGAGAGCAGGGCACAGCCATACATATTGTCCTGGTTGATGCAAGCACAGGCCATATTGTGACATCTGGTCCAGAGTCATGTGCAAAATTAGATGTTATTGTGCTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAGAGACCTCTTTTGACTGGTGATCTGCAAGTGATACTGAAGGATGGTGTAGGTACATTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTTCCTCAGATTGTAATGAGGGAAAGCGTATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAAGATCACCGGGGAGAATTATACAAGAAACACTATCCACCTGCCCTGAATGATGAGGTCTGGAGACTGGAGAAGATCGGCAAGGATGGGTCCTTTCACAAAAGGTTAAATAGAGCAGGAATATTTACTGTTGAAGATGTCCTTAGACTTGTGGTTAAAGACCCACAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGATGTCCTCGTTGAACATGCAAAGACTTGTGTTCTCAGCGGAAAACTTTATGTGTACTATCCTGATGATGCAAGGAGTGTTGGTGTTGTTTTCAATAACATCTACGAGTTGAGTGGCTTAATAGCTAATGATCAATACTACTCGGCTGATTCTCTCTCTGATAGTCAAAAAGTATATGTGGACACATTGGTGAAGATGGCATATGAAAATTGGATGCATGTAATTGAGTATGATGGCAAGTCTCTCCTAAATTACAATCAGAAGACATTGGGCACTGCTCAACTTCAACATTTAATGGATTCCCATAATTATTCAAATTCAAACTTGCTTGATCACCAGACCTCCTTCCCAAATTCACCTGTTCCTGTACCTACAAGGCAACCTTCGATGGATCCAGGAGTAACATTTGCAGGTTATCATGATAGTGCAGCTACTAGATTCTCAATGCAACCGCAGAATGCTAATCTTAATTCTTCAATTCAGTACGATAAGACAATGTTCCCACTACCAAACCAGATGATGAGTGCTTCACACCATGCTCAACTTCCAAGAAATGGTCCAACACAAATAGACACTCCTGGCTTACACACTAATGGCATTTCTAATCCTAGTTATAGAGGATATGAAGATTACTTTCCAGCGGAGGAGATTAGAAGCAGAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCATCTGCTACGCATTTTTAATATGGGTGGCCAACCCCGCACTCCGTTAAATGCCGAAGATGGATACCCTTGTTTATCTAACTACATGCCTACAGACTCCATGAGCTACAACTTTGACAATGAGCAGAACCGTTCGTCAGGAAAGGCCGTCGTGGGCTGGCTAAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAGGCAGCTGAGAGGCGGGCTCAGCTCGTTGAGTTGGATGACCTCTAG	1869	0.4318	MQTTYLERSREKRSLDSTSADEDEPQKKRPALASVIVEALKVDCLQKLCSSLEPILRRVVSEEVERALAKLGTAKLSGRTSPKQIEGHDVGNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLVDASTGHIVTSGPESCAKLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVILKDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCNEGKRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNRAGIFTVEDVLRLVVKDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARSVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKMAYENWMHVIEYDGKSLLNYNQKTLGTAQLQHLMDSHNYSNSNLLDHQTSFPNSPVPVPTRQPSMDPGVTFAGYHDSAATRFSMQPQNANLNSSIQYDKTMFPLPNQMMSASHHAQLPRNGPTQIDTPGLHTNGISNPSYRGYEDYFPAEEIRSRSHEMLENEDMQHLLRIFNMGGQPRTPLNAEDGYPCLSNYMPTDSMSYNFDNEQNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDL	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g00531	622	Pfam	Calmodulin binding protein central domain	252	318	IPR046830	-
	Aip10g00531	622	PANTHER	CALMODULIN-BINDING PROTEIN	6	620	-	-
	Aip10g00531	622	Pfam	Calmodulin binding protein-like N-terminal domain	93	240	IPR046831	-
	Aip10g00531	622	MobiDBLite	consensus disorder prediction	1	28	-	-
	Aip10g00531	622	Pfam	Calmodulin binding protein C-terminal domain	323	385	IPR046829	-
	Aip10g00531	622	PANTHER	OS02G0177800 PROTEIN	6	620	IPR012416	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g00531	Aip-Chr10	5284733	5288490	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g00531	1	621	Calmodulin-binding Proteins	AT2G18750	59.877	0.0	734

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip10g00531	-		-	gmx:100802994	995.342