Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00524 ATGACAAAAGTGTTTGACAAGTTGATGGATGTCAATGCACGAAAACTTGATTGGAACTTTCAAGTTTATATTGTCCACCTCTGGGAAGTTCCAAATATATTTAATATAAATGATATCAATGGAATAGAGATGGTTCTCCAAGATATTCAGGGTGGAAGGATCCAAGCCTCAATAACTAAACCTTTGGTCAAGAAATGGAGAGGCAAGATTCTGGAGTTCAAGATGTACATCATGACCCATTTTATTGTGGTGGACAAAAAGGAGAAAACCAGGACAACCAACAATAAATGGTCCATAAATTTCTCACATAGGACAACGGTTCAGCCTGTTGTTAAACCAAGCTATCCTCTGAAAGCATTTTGCTTTAAACCCATTCCGGAGTTGCTGGCTGCCGAAAAGCTGGAAGATTCAGTGCTAATAGATGTTATAGGGGAAGTGATTGGTAAAGAGGATCCAAGACAACTGATAACTAGCAAAGGAAGAGAGACAAAAAGATTGGCTGTGATACTTGAGGATCTTGAAAACAATAGTATTGGCTGTGTGTTGTTTGGACATATGGTCGACCAAATACTTCCATATCTAGAAGAAGGGAGGGTGGAGCCACTAATAGATATAGCATAG 621 0.3897 MTKVFDKLMDVNARKLDWNFQVYIVHLWEVPNIFNINDINGIEMVLQDIQGGRIQASITKPLVKKWRGKILEFKMYIMTHFIVVDKKEKTRTTNNKWSINFSHRTTVQPVVKPSYPLKAFCFKPIPELLAAEKLEDSVLIDVIGEVIGKEDPRQLITSKGRETKRLAVILEDLENNSIGCVLFGHMVDQILPYLEEGRVEPLIDIA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00524 206 CDD RPA1_DBD_A_like 21 107 - -
Aip10g00524 206 Gene3D - 4 109 IPR012340 -
Aip10g00524 206 Pfam Domain of unknown function DUF223 43 110 IPR003871 -
Aip10g00524 206 Gene3D - 113 203 IPR012340 -
Aip10g00524 206 SUPERFAMILY Nucleic acid-binding proteins 122 190 IPR012340 -
Aip10g00524 206 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00524 Aip-Chr10 5248182 5249078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00524 46 196 Core DNA Replication Machinery Family AT2G06510 25.490 7.60e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00524 - - ahf:112783518 416.772