Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00523 ATGACTCACGACGAACTCCAAATTGTTTCAGAAAAAACATCAGTGCAAAGTCATTTCGATATATCCAAGTTACGTATTAACCCTGACCTTGATGAGGTCAAAAAGTTTCGTAACAGGAGGCTTTCTAGCAAACCATCTAATTCGGCAAGGATTAGTCAAGTTTCATCCCGTGGTCCACGTTCTGGTGCAGACGAATTAAGAAATGGGGATGTCGTAGTCAAAACAATTGAAGAAGTTTTAAGCTCTACGCAGGAAGGACCTACATGGATTGCCGGTACTATTGTTTCGATCAATGCTGGGAAGGATGATTGGTTTTATAAATCCTGCCGAAAGTGTCCAAAGAAGGTAGACACCCCAATCGGCAACAGATATGAGTGTGAAAAATGTGGCCACACTCACGGTAGCGCATCATTTAGGTTCAAGGTTGAGGTAATGGTATATGATGGAACAGGAAGCTTGATGTTGCTGATGTGGGACAGGGAGACGGTACAATTTTGTGGGAGGCAAGCTGAGCAAATCAAGAATGAGGAAGTAATTCAAAACATTCATTAG 552 0.4221 MTHDELQIVSEKTSVQSHFDISKLRINPDLDEVKKFRNRRLSSKPSNSARISQVSSRGPRSGADELRNGDVVVKTIEEVLSSTQEGPTWIAGTIVSINAGKDDWFYKSCRKCPKKVDTPIGNRYECEKCGHTHGSASFRFKVEVMVYDGTGSLMLLMWDRETVQFCGRQAEQIKNEEVIQNIH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00523 183 MobiDBLite consensus disorder prediction 39 66 - -
Aip10g00523 183 Pfam Replication factor-A C terminal domain 92 175 IPR013955 -
Aip10g00523 183 SUPERFAMILY Nucleic acid-binding proteins 73 175 IPR012340 -
Aip10g00523 183 Gene3D - 57 182 IPR012340 -
Aip10g00523 183 MobiDBLite consensus disorder prediction 42 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00523 Aip-Chr10 5247227 5248088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00523 22 175 Core DNA Replication Machinery Family AT5G08020 24.841 4.13e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00523 - - aip:107623611 375.17