Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00513 ATGCCTTATCCTGTATCTGCTTTTTTTGAGTATTCTGCTTATATTTACTGTTACACTCATGATTCTGATGATGGTGCAAGTATGGGTATGGAAGTGCCACTACATCATTTCCCTATAGTTACAGGGGACGGCTTGCGGAATAGAAGCATTGAAAATAAAGCTGTGATTGTTAGTGAAGGGGAGAAGAATGTTTGGCCAGCAATTGCAGAAGGAAAGCTGAAGATCATCAATTCTTATCAGATCCAGCAGCGACGGTTTGAACTCACAAGTGAGGCTTTTCCTGAAAGTGCAAGATATATATTTGATTTTGAAATGGCTATTAACATCGTTGGTGCGATCACGGGCGTTATGAGCTGCCTCTGTACACAGAACTGTCTTCAAGAATCACTTGGTCATCATATTAGACACCTTAGAAGACCCAAAAGGAATTTGAACAAGCTCAAGTCATTGTTGGAGGAGCTAGATGCCCGGAAAGTCGACATGTGTGCCAAGCTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGAAAGAAGTGGAATTGTGGCTGAAAAATGTTGATGAGATTGCAAATGAAGTAAATAAGATCATAAGGGAAGTTGAACAAGAAAGTGGAAGCACAAGTGTTCTCTCTCCATTTTATTATAGTTCAAGAATAAAGAGAGGAGAACTTATTGAGAAAAAAATGGAGGAGGTGAGAGAGCTTCTAGAGAAAGGTCGATTTGCAGATGATTCATTGGCTGAAACTTCGCCTCGAAAAGGGCATACCCTTCCAACAACAAAGCTAATGGAACACGAAACAACAATGAAAAGCTTGAACAAGATTTTGAACTTCATATTGGATGATAGAGTGAGAATTATTGGTGTTCATGGGATGGGTGGAGTGGGGAAAACAACTATCATGGCTGAAATTAACAATAGACTATTGAGGGAAAATAGACTATTTGACAGTGTTATTTGGGTTAGTTCCTCAAAGGACATGAAAACTGAGGAGTTACAAAAGGTTATTGCAGGGAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAAGAGCTGCCACACTGTTTGAAGCTTTCCAAAGAAGGAAGAATTTTGCCTTGATTCTGGATGATCTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCAATTCCAACTGTGGAGAACGGTTGCAAACTGCTAATAACTACTCGAAGGGTAAGCGTTTGCCGAGGCATGGAAACAGATAGAGATGTTAAAGTAAAGGCTCTTACAGAAAATGAAGCATGGGATCTCTTCAGGGACAAAGTTGGGGATGAAGCATTGGCCTCTCCGGACATCAAACTGATTGCAAAAGATGTGGCAAAAGAATGCATGGGATTGCCTCTTGGTATTGTTACCGTGGGGCGTGCCTTGAGAAATGCAACTGATAGTTCAGAGTGGCAGATTTCATTGATGGGGTTAAAAGCTTCAGCTCTCAACATAGAACAAATGGAAGAATCTGTTTTCTCTCGTTTGAAATTCAGCTTCACAAAATTGAAGGATGACACAAGTAGGTCCTGTTTTCTATATTGTGCTCTCTATCCTGAAGGTAATCATGTTGATGCAAATGCATTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGTGCAGTGGATAGCATTTCAACAAGCAAACAGAAGGGGAAAATCATATTGAATGAACTAAAATATGCATGCTTGCTGGAAAATGCTGCAGACAATGAGATGGAATGTGTCAAAATGCATGACTTAATACGAGATATGGCCGTGACAATCATGAAAACAGATCCTCGATGGCACTGCATTGTCAAAGCCGGCAACAAATTGAAGAAACCTCCCCAAATTGATGAATGGACAGAAGATGCTCTAAGGGTGTCATTGATGAAAAATGATTTGAATAATATCTTTCTTGGCAATCCTCCATCATGTCCAGCTGTTACTTCCCTGTTATTGCAATACAACTCTTTCTCTCAAAATATACCTTATGACTTCTTTGATTTCATGCAAAGCCTAAAGGTTCTTGATCTCTCTTACACTGGGATCCATGTGCTGCCGGGTTCGGTTTCTAACTTAGAGAATCTATGTGCCTTATTATTGAGCAATTGCTGGAATTTGAAATTGATCCCTTCTGTGGCAAAACTCACTAAGTTGATGGTTCTCGACCTTTCGGGTTGCCGAAACATAAAGCAACTTCCCCATGGGACAGAACAGCTATGCAACCTGAGAAGACTAAATATTTCCAATACCATGATTAACATCTTGCCATCTGGTTTTCTCTCAGCTTTAACCCTTCTAGAGGAGTTATTAGCATCTAATGCTCTCGTCTTTCAAAAGTCATTGCCACTGAGCGTTTCTGAAATCAGCATCGGTGAAATCATATCCTCCTCAAGATTATCATCTCTTGAAGTGGATTTCTGGCACTGTGATCTCTATAATCTGTATGCTTGCTCTGGTCACTGTGCTCAGCTAGAGAAGTTCAAGTTCAATGTTGGACCAGGAGAAATCCAAGAATTTTCGGAGAAATGGAGTGTGGCATTTCTCAGCATATCCATTGCCAAAGAGGAAATTTCAATCCCAGAAAATACTACCGAGTTGAAGTTTATTGACTGCTATGATATCACAGAGTTAACTACTTGCCTTTTGCATGCAGAGAAGCTCAAGAAATGCACAGTAGTTTGCTGTTACAGTGTAGAAAGAATTGTTGACACTGAGCAGATTGATTTATCTATGCTGGAGACTTTGGTGCTGAGATATTTGATCAATTTGCAGATGATATGTAGGGAAGTGATGCCTTCATCTGCATTTATGAGATTAAAGATCATAAATGTAGAATTTTGTCCAAATTTGAAGAGCCTATTCTCAGGGAACCTTTTGCTTCAACTGTCAAATCTTGAAGAAATTAGAGTCGGCCACTGCAACAAGATGGAGGATTTGATGAGATGGGAAGGAGGAGGAAGAAACAGTAATGACATTCATGCTGCCAAAATTCACTTGCCTAGATTAAGGAAATTGAGGTTGGAGTTCATGCCAAATTTAAAAGGAATATATGATGGATTCATGAGTTATGGCTCTCCATGCTCTTTTCAAGTAGTTTCTTGTGATGCACTGAAGAGATTACCCTTTGATCTTGATGAATTAGTAGGCCTTAACCAGCAACTATTGTCACCGCATGCTTTGGAAATCAAAGGAGCAAAGTGTTGGTGGGATTCACTTGAGTGGGATGAACCTGATGCCAAGCAAATAATGCAGACATATTTCATAGAGATGCCAATAGTGGTGGGTGAAGTGGCAAGATCTTATTGGTTCACGTGTGACCCAATCTTTACACCACGAAGCACAGCAACATTTGGCCAAGAGAGAAGTAGTTGTTGGACTGGGGAGCCTTTGAGCTTGAGGTCAGTCAAAGTTACAAACGAGTTCGATCATTCATCAGCTTCAACTTCAATCCAACTAAGGTTCTAG 3474 0.401 MPYPVSAFFEYSAYIYCYTHDSDDGASMGMEVPLHHFPIVTGDGLRNRSIENKAVIVSEGEKNVWPAIAEGKLKIINSYQIQQRRFELTSEAFPESARYIFDFEMAINIVGAITGVMSCLCTQNCLQESLGHHIRHLRRPKRNLNKLKSLLEELDARKVDMCAKLNQMWLQKGMNPKKEVELWLKNVDEIANEVNKIIREVEQESGSTSVLSPFYYSSRIKRGELIEKKMEEVRELLEKGRFADDSLAETSPRKGHTLPTTKLMEHETTMKSLNKILNFILDDRVRIIGVHGMGGVGKTTIMAEINNRLLRENRLFDSVIWVSSSKDMKTEELQKVIAGKFDIDLSGFQDETSRAATLFEAFQRRKNFALILDDLWEPFSLERVGIPIPTVENGCKLLITTRRVSVCRGMETDRDVKVKALTENEAWDLFRDKVGDEALASPDIKLIAKDVAKECMGLPLGIVTVGRALRNATDSSEWQISLMGLKASALNIEQMEESVFSRLKFSFTKLKDDTSRSCFLYCALYPEGNHVDANALIEYWMWEGLLGAVDSISTSKQKGKIILNELKYACLLENAADNEMECVKMHDLIRDMAVTIMKTDPRWHCIVKAGNKLKKPPQIDEWTEDALRVSLMKNDLNNIFLGNPPSCPAVTSLLLQYNSFSQNIPYDFFDFMQSLKVLDLSYTGIHVLPGSVSNLENLCALLLSNCWNLKLIPSVAKLTKLMVLDLSGCRNIKQLPHGTEQLCNLRRLNISNTMINILPSGFLSALTLLEELLASNALVFQKSLPLSVSEISIGEIISSSRLSSLEVDFWHCDLYNLYACSGHCAQLEKFKFNVGPGEIQEFSEKWSVAFLSISIAKEEISIPENTTELKFIDCYDITELTTCLLHAEKLKKCTVVCCYSVERIVDTEQIDLSMLETLVLRYLINLQMICREVMPSSAFMRLKIINVEFCPNLKSLFSGNLLLQLSNLEEIRVGHCNKMEDLMRWEGGGRNSNDIHAAKIHLPRLRKLRLEFMPNLKGIYDGFMSYGSPCSFQVVSCDALKRLPFDLDELVGLNQQLLSPHALEIKGAKCWWDSLEWDEPDAKQIMQTYFIEMPIVVGEVARSYWFTCDPIFTPRSTATFGQERSSCWTGEPLSLRSVKVTNEFDHSSASTSIQLRF 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00513 1157 Gene3D Ribonuclease Inhibitor 604 843 IPR032675 -
Aip10g00513 1157 Pfam Leucine rich repeat 649 706 IPR001611 GO:0005515
Aip10g00513 1157 PRINTS Disease resistance protein signature 287 302 - -
Aip10g00513 1157 PRINTS Disease resistance protein signature 362 376 - -
Aip10g00513 1157 PRINTS Disease resistance protein signature 455 469 - -
Aip10g00513 1157 PRINTS Disease resistance protein signature 716 732 - -
Aip10g00513 1157 Gene3D - 420 506 IPR042197 -
Aip10g00513 1157 SUPERFAMILY L domain-like 580 1046 - -
Aip10g00513 1157 Pfam NB-ARC domain 271 507 IPR002182 GO:0043531
Aip10g00513 1157 Gene3D Ribonuclease Inhibitor 937 1064 IPR032675 -
Aip10g00513 1157 Coils Coil 144 164 - -
Aip10g00513 1157 Coils Coil 184 204 - -
Aip10g00513 1157 PANTHER DISEASE RESISTANCE PROTEIN RP 129 1054 IPR044974 GO:0006952
Aip10g00513 1157 PANTHER OS12G0491200 PROTEIN 129 1054 - -
Aip10g00513 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 259 522 IPR027417 -
Aip10g00513 1157 Gene3D - 247 417 IPR027417 -
Aip10g00513 1157 Gene3D - 507 595 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00513 Aip-Chr10 5142027 5149020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00513 285 759 WRKY Transcription Factor Family AT5G45050 22.667 1.59e-16 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00513 - K13459 aprc:113852063 912.909