Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip10g00500 | ATGGGATGTACAAATTTGGTGTTGCATGTTCGACTCTTTGTTACTCTGATGGTGATTCTTGCTGGAACTTTCTGTGCAGTTGGTGACACTGACGTAGTTGATGTTGCAGCAATCAGTAGTCTATATGTTGCTCTTGGCTCACCACCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAAATGTGGCAAGGTGTTGGCTGTGTATTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGTAGTAATTTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAACAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTCTTACGAGCTTGTCTCTCTCAGGAAACCAGTTAAATGGAAGCATTCCAGATGCTTTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAACAGGGACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCTGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATTGAGAATAACTCCTTCTCCGGGCCAATTCCGCCAAAACTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCTGCAGCCCCATCACCTGCAGCTATGGCTCCATCCCCTGGGAAATCACCATGGAGAGTAGCAAATAGTCCTTCTTCCCCAACTGCATCAATGCTTGCAAGTGCTAGGAAGTCATTTATAGCTAAGAATATCATTTGGATTGCTGGTGCTGGTCTTTTGATATTTATTTTGTTAGGCGTTTGTATTTTTATGCTGTGGTGCTTTAAACGAAGGCCAGAGAAGAAAAATGCCAAGAAGCAAAATGTTAGTGTCTTCGAAAGTCCTTTACATAAACCTACTTGCAGTGACACTTCCTTTGAAGCAACCAATCAGGAGGTGAAAGCAGTTGAGAAACCATCACTTGTATCTGAAGTGCTAAATAGAAAAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGGAAAATATGTGAAAACAGCATCTGCAACTTCACAATACAATCATGGTTCTGAGTTAATCAACACTAGTGAGGCTTCCAAACTTTCACACCTCCAGCCACCACCGCGTCCTTACCCAATGACACAAAGTCAGAAGTTGATCCTCAATCCAGCTATACCTGCCAAAGGGTCTGAAATAAATGACAAAACATGTTCCCTTGAAGTTTATTCTATTGCATCACTTCAACAATATACCAATAGCTTTTCCCAAGAAAATTTTATTGGGGAAGGCACCTTAGGGCCTGTTTATAGGGCTGAGTTCCCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGAGCAGAACCATGAACAATTTCTCCAATTAGTGTCCAACATCTCAAAAATTCAGCACCCTAATATTGTGAAGTTTACGGGCTACTGTACCGAGTATAGCCAACGGCTGCTTGTGTACGAGTATTGCAGTAATGGAACCCTGCATGATGCACTGCATGGCGATAGTGAATGCCGTATTAGACTAACATGGAATGCTCGAATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTTCGGCCACCTATTGTGCACCGAAATTTTAAGTCTGCCAATGTACTCCTAAATGACAACCTTGAAGTGTGCATCTCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGACTCCTCACGGCTTATGGTTACAGTGCTCCAGAATTTGAGTTCGGAAGCTATACACATCAAAGTGATGTATTCAGTTTTGGAGTGGTAATGTTGGAACTTCTCACGGGACGAAAATCCCACGACAGGTCACTTCCGCGAGGGGAGCAAATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCGAAAATGGTTGACCCCAGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCAGATATTGTTTCTTCATGCGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAAGATCTTCTAAGGATGATGTAA | 2166 | 0.4275 | MGCTNLVLHVRLFVTLMVILAGTFCAVGDTDVVDVAAISSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTLTSLSLSGNQLNGSIPDALSLLTQLSHLDLSNNNLSGQLPSSTGTLSSLTTLYLQNNQLSGTLYVLQDLPLQDLNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPAAMAPSPGKSPWRVANSPSSPTASMLASARKSFIAKNIIWIAGAGLLIFILLGVCIFMLWCFKRRPEKKNAKKQNVSVFESPLHKPTCSDTSFEATNQEVKAVEKPSLVSEVLNRKTNLIPKVQDEQGKYVKTASATSQYNHGSELINTSEASKLSHLQPPPRPYPMTQSQKLILNPAIPAKGSEINDKTCSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAEFPDGKILAVRKLDATASMEQNHEQFLQLVSNISKIQHPNIVKFTGYCTEYSQRLLVYEYCSNGTLHDALHGDSECRIRLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLNGAYPMKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM | 721 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip10g00500 | 721 | SUPERFAMILY | Protein kinase-like (PK-like) | 426 | 717 | IPR011009 | - | |
Aip10g00500 | 721 | Gene3D | Ribonuclease Inhibitor | 36 | 231 | IPR032675 | - | |
Aip10g00500 | 721 | Gene3D | Phosphorylase Kinase; domain 1 | 414 | 520 | - | - | |
Aip10g00500 | 721 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 10 | 147 | - | - | |
Aip10g00500 | 721 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 141 | 721 | - | - | |
Aip10g00500 | 721 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 | 10 | 147 | - | - | |
Aip10g00500 | 721 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 | 141 | 721 | - | - | |
Aip10g00500 | 721 | MobiDBLite | consensus disorder prediction | 232 | 251 | - | - | |
Aip10g00500 | 721 | SUPERFAMILY | L domain-like | 45 | 208 | - | - | |
Aip10g00500 | 721 | Gene3D | Transferase(Phosphotransferase) domain 1 | 521 | 721 | - | - | |
Aip10g00500 | 721 | ProSiteProfiles | Leucine-rich repeat profile. | 119 | 141 | IPR001611 | GO:0005515 | |
Aip10g00500 | 721 | PRINTS | Leucine-rich repeat signature | 120 | 133 | - | - | |
Aip10g00500 | 721 | PRINTS | Leucine-rich repeat signature | 141 | 154 | - | - | |
Aip10g00500 | 721 | Pfam | Protein tyrosine and serine/threonine kinase | 446 | 717 | IPR001245 | GO:0004672|GO:0006468 | |
Aip10g00500 | 721 | ProSiteProfiles | Protein kinase domain profile. | 443 | 721 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip10g00500 | Aip-Chr10 | 5048026 | 5053197 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip10g00500 | 30 | 721 | Strubbelig Receptor Gene Family | AT4G03390 | 50.000 | 0.0 | 652 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-V | Aip10g00500 | PK_Tyr_Ser-Thr | 7.3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip10g00500 | - | - | ahf:112783685 | 1300.42 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g03731 | 03 | 119479880 | 119483981 | Aip10g00500 | 10 | 5048026 | 5053197 | PCT |