Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00492 ATGGATAACATTGTAGTAGAGAGTACTACTACTTTGGGTTATATATATATAATAATGCTTTTCCTATCATTGAAACATGAAATAGTAGCAGCAGGAGATAACAACAGTGCCATTGATGACCTTGTGACTAACTTGCCTGGCCAGCCTCTTGTAGATTTCAAGCACTATGCTGGTTATGTCACTGTTAATGATGACACCAATAATGGAGAAAGAGCACTCTTCTATTGGTTTTTTGAAGCCATCACCAACCCTCAAGATAAACCATTGGTGCTGTGGCTCAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGACACAGATGGCAAGGGCCTTAAATTTAATAACTACTCTTGGAACAAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTAGGCTTTTCCTACTCAAATTCAACTATAGACTATGAAAATCTGGATGATGATATCACAGCTAATGATGCTTACAATTTTCTGCACAATTGGTTTCTCAAGTTTCCATCATATAGAACAAGCACATTTTATATAGCAGGAGAGAGCTATGCTGGGAAGTATGTACCTGAGCTAGCAGAACTGATATATGATAGGAAAGATGACCCTTCCCTTCATATTAATCTCAAGGGTATTTTGTTGGGGAATCCTGAAACATCTGATCCTGAAGACTTGTTAGGGCAAGTTGATTACGCTTGGAGCCATGCAGTGATATCTGATGAAACCTACAAAACAATAAGAAGAAGTTGTAACTTCAGTGATCCATATAAAAACAAAGATTGTGGTGATGGACTTGATGAACTTTATAAGCAATACGACCAAATTGATATTTATAGCCTCTACACCTCTGTTTGTTTTGCCACCACAGCGCTTTCAAATCATCAAAATTTACAAACACAAATCAACCACTCATCTAGGAACAAGATGCGTAGAATGATGGGAGGTTTTGATCCATGCTTGGATAATTATGCCAGAGCCTTTTATAATAGAGCAGATGTTCAGAAAGCTCTCCATGCCAGTGATGGTCTCATTCTCAAGAATTGGACTATTTGCAACGACGATATATTCAATAGTTGGAATTGGAACAAATCAAAGGCCTCTGTTATCCCAATATACAGGAAGCTTATTTCAGGAGGACTTAGGATTTGGGTTTATAGTGGAGACACAGATGGAAGAGTGCCAGTGCTTTCTACAAGATACAGCTTAAGTATTCTGGGTTTGGGAATCACTAAGCAATGGAGGCCATGGTACCATGAGAAACAGGTTAGTGGGTGGTATCAAGAATACGAGGGTCTCACTTTTGCAACATTTCGAGGAGCTGGCCATGCTGTCCCTTCTTTCAAACCAAGCAATTCACTTGCATTCTTCTCTTCCTTCCTTCTTGGACAATCTCCACCCTCTACTAGATCTACATGA 1443 0.3971 MDNIVVESTTTLGYIYIIMLFLSLKHEIVAAGDNNSAIDDLVTNLPGQPLVDFKHYAGYVTVNDDTNNGERALFYWFFEAITNPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNYSWNKEANMLFLESPVGVGFSYSNSTIDYENLDDDITANDAYNFLHNWFLKFPSYRTSTFYIAGESYAGKYVPELAELIYDRKDDPSLHINLKGILLGNPETSDPEDLLGQVDYAWSHAVISDETYKTIRRSCNFSDPYKNKDCGDGLDELYKQYDQIDIYSLYTSVCFATTALSNHQNLQTQINHSSRNKMRRMMGGFDPCLDNYARAFYNRADVQKALHASDGLILKNWTICNDDIFNSWNWNKSKASVIPIYRKLISGGLRIWVYSGDTDGRVPVLSTRYSLSILGLGITKQWRPWYHEKQVSGWYQEYEGLTFATFRGAGHAVPSFKPSNSLAFFSSFLLGQSPPSTRST 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00492 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 474 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 Gene3D alpha/beta hydrolase 37 296 IPR029058 -
Aip10g00492 480 Pfam Serine carboxypeptidase 47 469 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 Gene3D - 328 364 - -
Aip10g00492 480 Gene3D - 377 471 - -
Aip10g00492 480 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Aip10g00492 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Aip10g00492 480 PANTHER CARBOXYPEPTIDASE 33 474 - -
Aip10g00492 480 SUPERFAMILY alpha/beta-Hydrolases 39 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00492 Aip-Chr10 4918703 4922660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00492 311 472 Calmodulin-binding Proteins AT2G22960 29.825 1.94e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00492 K16297 - gmx:100819700 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00492 10 4918703 4922660 Aip10g00492 10 4918703 4922660 ECH
Aip10g00492 10 4918703 4922660 Aip04g00501 04 5922892 5925376 ECH
Aip03g03739 03 119561758 119564340 Aip10g00492 10 4918703 4922660 PCT