Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00481 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTACAGGACTTGATTGGAACAAGGCCTTGTTGCAATCATCACAAAACTTGGAGTTACCATCAAAGATTACTACTATGAAGAAACAACAACAACAACAACAACAACAACAGCAACAACAAATTCAGCAGCAGCAACCAATATTAGAGCCTTTGAGGTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAATCTCAGCCTCGCCATTTCTGTAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACCCTCCGCAATGTTCCTGTTGGAGGTGGAAGAAAGAATAAGAGACCAACCAAGAAATCAACAACCACTACTTCTATTAGCACCACCACCACTACCACTGTTACCACCTTAAATGGTGGTGGTGGAAAAATGGAAGTTCAACCTCAGAGTAATCGTCCTCTTCCTCCTCCTCCTCCTACTCTTTACCAATCTATGATTCGTCCACCACCCTTGCTACCACAACAGAATAATAATAATCTATCAGAAGTTAAGGACTTTGGTGGTAGTGGAATGTTTCTGAGTTCATCATCATCAGCTTTGAATCTTCCTCAGAGTCAAAGTCTAATCTTTCCCTTCTCAACAACATCAAGTTCTAGTTTTGATGCAAACCCATGTTCAGTTTCAGCCTCCAATATTTATAGCTATGGTGGAGAAGAGTTTAAGACAATGGAGGAGACAACCATCAATGGTACTAACACACACCTATGGGAGATTCCATTACCTGCTACAACAACAAGTGTTGCTATGGAAATGCCTTCAAATTATTGGGGTTGGGAGGACCTTGATCCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 897 0.408 MGLSSKQVSSTGLDWNKALLQSSQNLELPSKITTMKKQQQQQQQQQQQQIQQQQPILEPLRCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPTKKSTTTTSISTTTTTTVTTLNGGGGKMEVQPQSNRPLPPPPPTLYQSMIRPPPLLPQQNNNNLSEVKDFGGSGMFLSSSSSALNLPQSQSLIFPFSTTSSSSFDANPCSVSASNIYSYGGEEFKTMEETTINGTNTHLWEIPLPATTTSVAMEMPSNYWGWEDLDPLVSTDLNVPWDDSDIKP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00481 298 MobiDBLite consensus disorder prediction 101 152 - -
Aip10g00481 298 MobiDBLite consensus disorder prediction 33 52 - -
Aip10g00481 298 PANTHER OS06G0284500 PROTEIN 39 226 - -
Aip10g00481 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 226 IPR045174 GO:0003700|GO:0006355
Aip10g00481 298 Pfam Dof domain, zinc finger 60 112 IPR003851 GO:0003677|GO:0006355
Aip10g00481 298 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Aip10g00481 298 MobiDBLite consensus disorder prediction 117 143 - -
Aip10g00481 298 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00481 Aip-Chr10 4784777 4786565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00481 50 127 C2C2-Dof Transcription Factor Family AT5G60200 65.823 1.70e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip10g00481 zf-Dof 5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00481 - - gmx:778119 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03758 03 119843468 119844415 Aip10g00481 10 4784777 4786565 PCT