Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00449 ATGATGAAGCACATGAACTCGCAGCTTCTTCCACCATTTCTTGCATCAGTTGTTGTTCTTTTGAGCTCAATATCTGCCACTGATTTTGTCTTCAATGGCTTCAACTCCTCTGATGTGTTGTTGTATGGGAATGCAACCATTGACTCAAGAATCCTAACCCTCACACATCACCAAACTTTCTCAGTTGGTCGTGCACTTTACCATAAGAAGATCCAAACCAAGAAGTCAAATTCTTCTTCCTATGTCTACCCTTTTTCCACTTCCTTTATATTCTCCATGGCACCTTTTAAGGACACTCTTCCTGGCCATGGATTTGTCTTCATCTTCACACCAGTCACTGGCATATTCCATGGTACAAGCACTGCTTCTCAGAATCTGGGGCTCTTCAACTTCACCAACAATGGAAATTCAAGCAACCATGTGTTTGGTGTTGAGTTTGATGTGTTCAAGAACCAGGAGTTTGATGACATAAGCGCCAACCATGTTGGAGTTGACATAAACTCTCTCACCTCTGTTGCATCTCATGATGCAGGGTATTGGCCAGATGAAGATCATGATTCTTTCAAGGAATTGAAGCTCAACAATGGTGAGAACTACCAAGTTTGGATTGAATATGAGGATTCTTTGCTCAATGTTACCATGGCAAAGGTTGGTATGAAAAGGCCTATGAAACCTTTGTTGAATGTTTCTCTTAACTTGTCTCAAGTTTTTGTAGATGAGATGTTTGTTGGATTTACCAGTTCCACAGGGCAATTAGTTGAGAGTCACAAGATTCTTGCTTGGAGTTTTAGCAACACTAATTTTTCATTAAGTGAAGAACTAATTACTACTGGTTTACCCTCTTTTGTTCTTCCAAAGGATTCAATTTTCAAGTCAAAGGGGTTTGTTGCAGGGTTCACAGTAGGTATCTTCTTTGTTGTTTGTGTCTTTGTTTTGCTTGCAATGTTTTTTATTCGGAGAAAGAGAAGGCTTGAAAGGAAGAGAATGGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACACAGAATGACATATGAAGAAATTGAGGCAGCAACAAAGGGATTCTGTGAAGAAAATGTGATTGGAGTTGGTGGCAATGGTAAGGTCTACAAGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCCGTGAAGCGAATATCACAAGAGAACGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAATCATCAAAGATGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCTGCAATGTGTTACTTGATAAAGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAACAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAGACCGGACAAGCCTCGACTCGCACGGATGTGTACATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGTTTGTGTGGGGACTAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGAGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAACATGAGACAAGTTGTGAGTATTTTAGAAGGGAAGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTGTTTGCTTCTAAAGTTGAAATCTGGGGATATTTTTTCTGAGTATTCTAATTATTTTAGCTATTCAACACACCCAACATTTGAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAGTTGAGGGTAGATGA 2073 0.4081 MMKHMNSQLLPPFLASVVVLLSSISATDFVFNGFNSSDVLLYGNATIDSRILTLTHHQTFSVGRALYHKKIQTKKSNSSSYVYPFSTSFIFSMAPFKDTLPGHGFVFIFTPVTGIFHGTSTASQNLGLFNFTNNGNSSNHVFGVEFDVFKNQEFDDISANHVGVDINSLTSVASHDAGYWPDEDHDSFKELKLNNGENYQVWIEYEDSLLNVTMAKVGMKRPMKPLLNVSLNLSQVFVDEMFVGFTSSTGQLVESHKILAWSFSNTNFSLSEELITTGLPSFVLPKDSIFKSKGFVAGFTVGIFFVVCVFVLLAMFFIRRKRRLERKRMEMEDWELEYWPHRMTYEEIEAATKGFCEENVIGVGGNGKVYKGVLRGGAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRIIKDVAFAVLYLHEGWEEQVLHRDIKACNVLLDKDMNGKLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVIKTGQASTRTDVYMFGILILEVMCGRRPMEEGKPPLVEFVWGLMVKGELMNALDERLRAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGKNNEGGEESENENADTCLLLKLKSGDIFSEYSNYFSYSTHPTFEDIRQSNTSSMSLTWSKSVVEGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00449 690 Gene3D Phosphorylase Kinase; domain 1 317 430 - -
Aip10g00449 690 PANTHER - 17 683 - -
Aip10g00449 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Aip10g00449 690 Gene3D - 25 276 - -
Aip10g00449 690 SMART serkin_6 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00449 690 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Aip10g00449 690 CDD STKc_IRAK 361 624 - -
Aip10g00449 690 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Aip10g00449 690 Pfam Legume lectin domain 27 268 IPR001220 GO:0030246
Aip10g00449 690 Pfam Protein kinase domain 357 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00449 690 ProSiteProfiles Protein kinase domain profile. 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00449 690 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 17 683 - -
Aip10g00449 690 CDD lectin_legume_LecRK_Arcelin_ConA 27 266 IPR001220 GO:0030246
Aip10g00449 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 270 IPR013320 -
Aip10g00449 690 Gene3D Transferase(Phosphotransferase) domain 1 431 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00449 Aip-Chr10 4420258 4422498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00449 24 570 Receptor kinase-like Gene Family AT4G04960 66.727 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip10g00449 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00449 - - gmx:100804391 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00449 10 4420258 4422498 Aip10g00449 10 4420258 4422498 ECH