Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00444 ATGAAGGAAAAGAAGAACACATTATTAGGAACAATTCATCAAATACCAAATAATAGAGGCATATTAGGAAACGGTGGTAGTGGCAATAATAATAATGTTATTGGGATTAGATCTCCACAAATTGAGATCCAACAAATGGGATTCACCTTAATGGTTGTTCTCATAACTGCCTTGGATTCTCATTATTTCATGTTCATTGAGGCCATTCGTGTTCTTCATGAAGAAGGTGCAGATGTTGTTAGCGCCAGTTACAAGGTTGTTCAACATGCTGTTTTCCATACAATGCACTGTCAGGTAGGGGAGTATGGCAATGGAGCTGCTGCGAGGATATCAGAGAGACTGAAGAAGTTTGTGAATGATTCTACTTATTGTCCCTTTTAG 381 0.3832 MKEKKNTLLGTIHQIPNNRGILGNGGSGNNNNVIGIRSPQIEIQQMGFTLMVVLITALDSHYFMFIEAIRVLHEEGADVVSASYKVVQHAVFHTMHCQVGEYGNGAAARISERLKKFVNDSTYCPF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00444 126 PANTHER TRANSCRIPTION FACTOR BHLH162 1 120 - -
Aip10g00444 126 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 120 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00444 Aip-Chr10 4367819 4368608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00444 39 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 52.439 8.69e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00444 - - gmx:100784418 124.405