Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00443 ATGGTTGGAGCTTTCGAAGTTGGCCCCGTTCCATTCAACCCGGACGGCTGGGGCCCTCCGGAATCCGCCGCTGCAGCCGCCGCCACTACCAACAGCAACCTGCCACTGAACGTACCATTCGCTCCCTTCTCTCGCTCTGACAAGCTTGGCCGGATTGCCGACTGGACCCGCAACTTCAACAACCCGTCCCGCCCTAAGAACCCCGCCGATTCCGTATTCGACTTCTCCAACGACGATTCCTTCCCTGCCTCCGCTGATGACGACTCCTCCTTCCGCCTCGTTGACGGTAAGCCCCCTCCAAGGCCCAAATTCGGCCCAAAGTGGCGCTTCCAGCAGCAGCGCCAGCTCCCCCAGCGCCGCGACGAGGAAGTCGAGGCCCGAAAGCGCGAGGCCGAGAAGGAACGTGCCCGCCGCGATCGCCTCTACCACCTCAACCGCTCAAACGCCAACGCCAACCGCCGCGAAGCCGCCGTGTTCAAATCGTCCGTCGATATCCAACCGGAATGGAACATGCACGACCAGATCCCCTTCTCCACCTTCTCAAAGCTCTCGTTCTCCGTCCCTGACCCCGAAGATCTCCTCCTATGCGGTGCTCTTGAGTACTACGACCGCACCTACGACCGCATCACACCGAAGAACGAGCGCCGCCTGGAGCGATTCAAGAATCGCAACTTCTTCAAAGTCACCACCACTGATGATCCCGTTATTCGCAGGCTCGCCAACGAGGACAAGGCGACTGTTTTTGCAACTGACACTATCCTCTCCACACTCATGTGCGCCCCTAGGTCGGTTTATTCATGGGACATCGTTGTGCAGCGCGTTGGGAACAAGTTGTTCTTTGATAAGCGTGATGGCTCCCAGCTTGATTTGCTCTCTGTTCATGAAACTTCCCAAGAGCCTCTTCCCGAGGCTAAGGATGATATCAACTCTGCACATTCGTTGAGTGTTGAAGCTGCTTATATTAACCAGAATTTCTCTCAACAGGTTCTTGTTAGGGACGGAAACAAGGTGAGTTTCGATGAACCTAATCCTTTTGCTAACGAGGGCGAGGAAGTTGCATCTGTGGCCTATAGGTATAGGAGGTGGAAGCTCGATAATGATATGTATCTCGTGGCGAGATGTGAGGTGCATAGTGTTCTTGAGCTGAATAAGAACAAGTCTTTCCTTACTTTGAATGCTTTGAATGAGTTTGATCCCAAGTATTCCGGTGTCGATTGGAGGCAGAAGTTGGAGACTCAAAGGGGAGCTGTGTTGGCCACTGAGCTCAAGAACAATGCTAATAAGTTGGCTAAATGGACTGCGCAGGCGCTGTTGGCCGGCGCCGATATGATGAAGCTGGGATATGTGTCTAGAATCCATCCCCGTGACCATTTCAATCATGTGATTTTGGCTGTGGTTGGGTACAAGCCTAGGGACTTTGCGGCGCAAATCAATTTGAACACGTCTAATATGTGGGGAATTGTTAAGTCTATTGTAGACTTGTGCATGAAGCTCAATGAGGGTAAGTATGTTCTTGTGAAGGACCCGTCTAAGCCGCAGGTTAGGATCTATGAGGTCCCACCCGATGCATTTGAAAACGACTATGTGGAGGAGCCACTTCCTGAGGAGGAACAAGTTCAACCTCCAGCAGAGGGTGCTGATGGTGTAGATACAAATGTTACTGCAAACGAGGCCGAGGCTAAGGAGATAGATGATCAAGCTTAG 1704 0.5282 MVGAFEVGPVPFNPDGWGPPESAAAAAATTNSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPSRPKNPADSVFDFSNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANANRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFSVPDPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRDGNKVSFDEPNPFANEGEEVASVAYRYRRWKLDNDMYLVARCEVHSVLELNKNKSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLAGADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDYVEEPLPEEEQVQPPAEGADGVDTNVTANEAEAKEIDDQA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00443 567 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 518 IPR007783 GO:0003743|GO:0005737|GO:0005852
Aip10g00443 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 5 551 - -
Aip10g00443 567 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 530 IPR007783 GO:0003743|GO:0005737|GO:0005852
Aip10g00443 567 PIRSF Transl_init_eIF3d 1 548 IPR007783 GO:0003743|GO:0005737|GO:0005852
Aip10g00443 567 MobiDBLite consensus disorder prediction 57 135 - -
Aip10g00443 567 MobiDBLite consensus disorder prediction 114 135 - -
Aip10g00443 567 MobiDBLite consensus disorder prediction 526 567 - -
Aip10g00443 567 MobiDBLite consensus disorder prediction 1 28 - -
Aip10g00443 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 551 IPR007783 GO:0003743|GO:0005737|GO:0005852
Aip10g00443 567 Coils Coil 119 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00443 4 565 Eukaryotic Initiation Factors Gene Family AT4G20980 77.397 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00443 K03251 - gmx:100799613 964.911