Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00431 ATGGAGAAGCAGAAGGAGGAAGGGGGAGTAAAGTGCCCTCGATGTGATTCATCAAACACCAAGTTTTGTTACTACAACAACTACAGCTTGTCACAGCCAAGGCACTTCTGCAAAGCCTGCAAGAGATACTGGACAAGAGGTGGAACCCTCAGAAACGTTCCTGTTGGCGGCGGTTCCAGGAAGAACAAGCGTCGTCTCAACCACCCACACCCAAACACTACTTCTTCTCAGATCAACAACAACAACGATGATGTGAATCTCCCCTCCTTATTCCACACCTTCACTTCTGATGCTGCTCTTCAAAATAATCATGTCTTTGCTGCTTCTTCTTCAAGCTATGATTCTATCTTGTTACCTCCAACTATGATGCCGATGCAACAAAACCTCATCAATGGTGGTTATTATTGCCAAAACCAGATCGAGCAGCAGCATCATGTGCCTAATTTCTCTGATCCAAATTCTCTTTATTATTGGAGTAATGCTTTCACTTCTTGGAACAACGATAATAATCATCATCTTACTTCTCTCATCTAA 534 0.4307 MEKQKEEGGVKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGSRKNKRRLNHPHPNTTSSQINNNNDDVNLPSLFHTFTSDAALQNNHVFAASSSSYDSILLPPTMMPMQQNLINGGYYCQNQIEQQHHVPNFSDPNSLYYWSNAFTSWNNDNNHHLTSLI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00431 177 ProSiteProfiles Zinc finger Dof-type profile. 10 64 IPR003851 GO:0003677|GO:0006355
Aip10g00431 177 PANTHER DOF ZINC FINGER PROTEIN DOF2.4-LIKE 2 141 - -
Aip10g00431 177 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 141 IPR045174 GO:0003700|GO:0006355
Aip10g00431 177 MobiDBLite consensus disorder prediction 51 81 - -
Aip10g00431 177 Pfam Dof domain, zinc finger 10 64 IPR003851 GO:0003677|GO:0006355
Aip10g00431 177 ProSitePatterns Zinc finger Dof-type signature. 12 48 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00431 Aip-Chr10 4279048 4279581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00431 10 64 C2C2-Dof Transcription Factor Family AT1G28310 94.545 1.65e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip10g00431 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00431 - - adu:107468324 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00431 10 4279048 4279581 Aip10g00431 10 4279048 4279581 ECH
Aip03g03804 03 120390680 120391833 Aip10g00431 10 4279048 4279581 PCT