Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00429 ATGGAGGTGTCTTTGAGCCAGGAGGATGCTGATCGTGGAGGGAGTGATGGTGATGCTTACGATGTAGAAAATTCTGAGTTGGAAGACCTTGCCGGACTAAGTGTGAATAACATCCTTAAGAAGGCATGGGACAACGTTGATAATGCATATGAGTTCTATCGGGGTTTCAAAAAATTGCATGGATTCGGTGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTTGTAAGGTACATGTTTTTTTGTAACAAGGAAGGCTTCAGGGAGCGTAAACACTACGACAGGGTTGACAGAATGAGGGTACACAAACCGGAAACAAGAACTAACTGCAAAGCAATGTTATCGGTTTATTTAGACAAAAATGATAAGTATTGGAAGGTTAGGAAGTTAGTAACCGAACACAATCACGACCTGACACCGGCAGGAATGGTGCACTTGATTGCCAATCATCGTCGGTTAACGGAAGTTGCAAAGAGTCAGATAGTTGGGATGCAAGCACATGGTATTGCGACCTCTAAGATTGTAGGGTACATGGCTGGTATGGCCGGGGGATATTCGTTGTTGGGGTTCCTGAAGAAGGATGTCTATAACTATGCTGACAAAATGCGGCGCATTAAAATAGCTGATGGCGATGCGAATTCTGCATTAGTATGTCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTACTGACAACAGGCTGGCGAATCTGATTTGGGCCGACGGATGTAGCAGAGTCGATTACCAATACTTTGGCGATGTGTTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGACCTGTTGTGATTTTCTCTGGATCAAACAATCATAAGCAGACCACCATATTCGGGTTTGGGATGTTGCATGACGAAAGTCTAGCATCCTATCGGTGGATGCTGGAGAATTTGATGGAGATCATGTGTCGCAAGAAGCCATCTGTAGTGGTTACCGATGGGGACAAAGCTATGACCAAAGCCGTGTCTGAAGTCCTCCCCGAGTCGACGCATCGGTTGTGTGCATGCCATGTGGAGAAGAATGTCACATCGAATGTCAAGGATGATGATTTACGTGGGCTGTTCAGAAGGTGGTTGTACGCAGACATGATGACAGATGTATTTGAGTCGGAATGGGAGCAGGCTGCCGAGGACTATGGCCTCTGCCAGAAGCAGTGGTGGTGCCAGATGTATGAGAAAAAGGAGATGTGGGCAAGTGCTTATCTCCGTGACAAGTTCTGGGCGGGGTACCGGACCACATCCCACTGTGAAGGAATTAACACATATGTGAACAAGTTTTCCAAATCCACCCACACAATTTTGGAGCTGGTGCAATGCTTAGATTTGGTTGCCCGTGAATATCGGAATAAGGAAATGCTTCTCCAGTTTAAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTTAGAAGTCTTGAACGACATGCCGCTTCAGTGTACACCAGAGAAGTTTTTGATGTTAAGAAGGAGATCGAGGGGGCTGGTGCGTTGATCCTGATTAGCACAAGGAGGATCATGAATACAATGATATACACCTTAGAGGAGTACGAAGATCCTGATGTCCACATAATGTCCTCATTTGGACGGTCAACCCGGAAGTTAAGTTGCCTGTGTAATTTCTGGAAGAAGCAGGGTTATCCCTGCAAGCATATGTTCTTCGTCATGAAGGCAGAGCACCTAAAGGAGATACCCGAGAAGATAGTTCTGCGTAGGTGGAGAACTGATGCAAAGTCCGCTGAGCAGTACACAGAAAATTGA 1806 0.4585 MEVSLSQEDADRGGSDGDAYDVENSELEDLAGLSVNNILKKAWDNVDNAYEFYRGFKKLHGFGVRKGDSGKDCEGNLVRYMFFCNKEGFRERKHYDRVDRMRVHKPETRTNCKAMLSVYLDKNDKYWKVRKLVTEHNHDLTPAGMVHLIANHRRLTEVAKSQIVGMQAHGIATSKIVGYMAGMAGGYSLLGFLKKDVYNYADKMRRIKIADGDANSALVCLEGKAESDPMAIAKYNVTTDNRLANLIWADGCSRVDYQYFGDVLAFDSTYRKNKYKRPVVIFSGSNNHKQTTIFGFGMLHDESLASYRWMLENLMEIMCRKKPSVVVTDGDKAMTKAVSEVLPESTHRLCACHVEKNVTSNVKDDDLRGLFRRWLYADMMTDVFESEWEQAAEDYGLCQKQWWCQMYEKKEMWASAYLRDKFWAGYRTTSHCEGINTYVNKFSKSTHTILELVQCLDLVAREYRNKEMLLQFKSINSVPVMTTCLRSLERHAASVYTREVFDVKKEIEGAGALILISTRRIMNTMIYTLEEYEDPDVHIMSSFGRSTRKLSCLCNFWKKQGYPCKHMFFVMKAEHLKEIPEKIVLRRWRTDAKSAEQYTEN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00429 601 ProSiteProfiles Zinc finger SWIM-type profile. 537 575 IPR007527 GO:0008270
Aip10g00429 601 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Aip10g00429 601 SMART 26again6 550 577 IPR006564 GO:0008270
Aip10g00429 601 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 600 IPR031052 GO:0006355
Aip10g00429 601 Pfam MULE transposase domain 263 357 IPR018289 -
Aip10g00429 601 PANTHER OS02G0262500 PROTEIN 37 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00429 Aip-Chr10 4240624 4242429 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00429 MULE 1.2e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00429 - - aip:107620053 971.459