Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00411 ATGGAGGGGGAAGCTGCTTCGGACGCAGAGATTGAGAACAATAATACTCAGAAGAGGGAAGATGCTGTTGGTGATAACAGCAATGAGAACAACAATGGAAGCAACAGCAAAATTGGTAACTCGAATGAGGGTCAGAGCAAGCCCAAGCGACAGATGAAGACCCCTTTTCAGCTTGAGACACTGGAGAAAGCTTATGCTTTGGAGACTTACCCTTCAGAGACAATGAGGGCTGAGCTCTCTCAGAAGTTGGGGCTGTCCGATCGGCAGCTACAGATGTGGTTCTGCCACCGCCGGCTGAAGGACAAGAAGGATTTGCCGCCTAAGAAGCAGAAGAAGGCAGTGCCGGCGCCAGTGCCAGTGCCAGTGCCAGTGCCGGCACCACCTGTGCCAGATTCTCCTCCAGACCTCAGACTGGGCCCTGAGCAAGTTAATGAGTATGGATCCGGGTCAGGTTCGGGCTCCAGCCCGCTTACCCGCCCTGAGTTTCGAAATGTAGTTCCCCGGGGTGGTATGCTGGGGTACTATGAGCCACCAAAAGCTATGATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTGGGGCAGCCACTGAGGGACGATGGACCCATACTCGGAGTAGAGTTTGATCCTTTGCCCCCAGGTGCTTTTGGGGCACCCATAGCTGTTACAGAACAGCAAAAGCGACCTAGTCTTGCTTATGACAGTAAAATGTATGAAAGACACGATGTTAGAACAAATAAGGCTATGGCGAGGACATTACCGGAATATCCATTTCTTCCAAACCAGCCTGGCATTAGGTCAGATGCCTTTGGACAATTAAATCCACCTCATTTACATGATCCAATAGACGGTCCTTCCAGAACTTCCTTCCCTATAAATGAACAGCTGCACAAAATTCATGCTACCCAAAGTCATTCTGCTCGTGTTCGCGTTTCATCTCAGCAAGACAAGCAAGTGATTCCTTATTCATCTCCTCCTCGAGAAGTTGATGTTGCCCTGCCAAGGGAATCATATGCAAACATAGCTAATGCTGGAATAGACTCCCACTTCGCCGATCATCCGATTGCTGGTCAAGAAAATCCTTATGCTTTACCCAGTGGACAAGTTTTGCAGAACGATATGACAATCCGAATAGAAAAGAAACGAAAGATTGATGATGCCAAAATTGCAAAGGAGGTTGAAGCCTATGAAACGAGGATGAGGAAAGAGCTTGAGAAGCAAGATAACCTTAGACGAAAGAATGAAGAGCGACTAAGGAAAGAAATGGAGAGACAAGAACGTGAAAGAAAAAAGGAAGAAGAGAGACTGATACGCGAGAGACAGCGAGAAGAGGAAAGATCTAGGCGTGAACAAAGACGTGAAATAGAACGGAGGGAAAAGTTTTTGATGAAAGAACACTTGAGAGCTGAGAAAAGAAGACGAAAAGAAGAGCTTCGCAAAGAAAAAGAGGCTGAGAGAAGGAAGGCTGCCCTTGAAAAGGCTGCTGCCCGTAGAATAGCTAAGGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGCTGGCTGCTACAAGCAAGGGACTTTCCTCGATTATACAACTTGATCTTGATACATTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTTTTTTCCCACCTAAGAGTGTAAAGCTGAAAAGGCCATTTGCTATCCAACCTTGGATTGACTCTGATCAGAATGTTGGCAACCTCCTCATGGTTTGGAGATTCCTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTCACTCTTGATGAGTTTGTGCAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTAACTCTTCTTAAAGTTATAATAAAGGACATTGAAGATGTTGCAAGGACACCTTCAACAGGATTAGGAATAAGCCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAAATTGTGGAAGGAGCATATGCATGGGGCTTTGACATCCGAAATTGGCAGAAGAACTTAAATCAGTTGACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCAGCAGGATTTGGACCAAAGCTGAAGAAAAGAAGTATTACATGGTCATATGCAAATGATAAAGATGAGAAAGGTCTATTAGCTCCTCGAAGGTCAAGGCACAGGTTAACTCCAGGAACAGTTAAATTTGCTGCCTTTCATGTTCTCTCACTTGAAGGTAGCAAGGGTCTAACAGTACTTGAGCTAGCGGAAAAAATTCAGAAATCTGGTCTTCGGGACCTAACCACCAGCAAGACACCAGAAGCATCAATTTCTGTTGCTTTGACTAGAGACACTAAGCTTTTTGAAAGGATAGCTCCATCAACCTATCGAGTGCGTACTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTTTCCGCAGCAAGAAAGAAAATTCAGATATTTGAAAATGGATTTCCAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGATGTTGATGATCTAGTAAACCCTTCAAGTGCTGATCCAATTTCTGGACAGTTTGATGAACCAAATGTTTCCACACCAAATGGAAAAGAAAATTTGGATAATGATGTAAAACTTGATCAAAATGAGTTTGAAATGGATTTGCCTTGTTTTGTTGAGGATGGTTACAAGGAAGCTGATTGTCCTGGATCTGTCACCGAACAACCTGTTGTTTGTGAAGATTTGAATACTGGAAATCCTGATCAAGACAATATGGAAATTGATGAAAGTCAATCTGGAGAATCCTGGGTGCAAGGACTTGCTGAAGGAGAGTATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTAGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCTATTCGTGTTGTTCTGGAGGATCGTCTGGAAGCAGCAAATGCTCTGAAGAAGCAGATGTGGGCTGAAGCACAGATAGATAAAGTTCGTCTGAAAGACGATACTATTAACAAACCAGATATTCCATTACTTATTGCCAACAAAGTTGAAACACATGACACATATCCTGCTGCTGTGGAGGGCAGTCAAAGTCCAATGCTTGACATTAATATTAATACTATTAATATTGAAACATCACCTGGCACTGCAGAAAACCAAAAGCCAGCACCTGCTGCACAGAGCTTGCATGGTGAAAAGTCCTCCCTAATTCAAGATTTGTGCACAGGCACAGGTCCAGATCACCCTCAGGTGCAGGTACCTCCACAATATTCAAAAAGATCACGTTCACAGTTGAAATCTTATATTGCCCACATAGCAGAGGAGATGTGTATCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCTGGTAGGATCTTTGTTGAATATCATGATGGCAATTGGGGGCTTATTGATTCTGAAGAGGCCCTTGATATTCTTTTGGCAGCATTGGATTCAAGGGGGATCAGGGAATCTCATCTGCGATTGATGCTGAAAAGGATTGAGAAGTCCTTTAAAGAAAATGTTCGAAGGAATACACAATGTGCCAGTGCCAAAATAGGGAGCAAAGATAAATTTTCGATCAAAAGTGAAGAAAATAATGGACCATATTCAACACCTGATCGCCATGTTGGATCTGACAGTCCTAGCAGTACTCTTCGTAACTTGAACTCTGACAAATTGGAAACATCATCATCCTTCAAGATTGAGCTTGGGGAAAGTGAGAATGAGAAGAAAGCTGCCATACAAAGGTATCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATAATTCATCAATATTATGTGCAACAAAATATGGGAAAAAGAGATGCAAACCTCTGGTGGACGTTTGTGACCTCTGTCTGCAACCTTATTTTGTTGAGGACTCCCACTGTAAATCCTGCCACAGGACTTCCGCTACAAATAATGGATTTAGTTTTACTAAGCATGCATTTCATTGTGGAGACAAGTTACACAAAAATGTTTCTATGGAATCTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGTTCTGTTTGCTTGTATTGAGGCATCAGTTCTCCCCGAAGCATTTGGAACAATTTGGACGAATGATGCTAGGAAGCATTGGGGTGTGAGGTTGAGCAAATCATCCTCTGTTGAGGAGCTTTTACAGATATTGGCCTTGTTTGAGAAAGCTCTACGGAGAGATTTTCTATCATCAAACTTCTCTACAACAGATGAACTATTGGGACTGAGCAATATGGGTGGTAATGCTTCACTTACTTCCACTGATCCTGAATCGGTAGCTGTACTTCCATGGGTTCCACAAACTACTGCAGCAGTGTCTCTCAGGCTTCTTGAGATTGATTCATCTATCAATTATGTACATCTTGAGATACCTGAGCCATGCAAAGAGAAAGAAGCGAAAGAGTACATCAAGCTTCCTTCAAGATATACGTCCTTCAAATGCAATAGAGAGGTTGAACCAGCAGAGTTAGGGCATGGTGAATTCATTAAAGATAAATCTGCTTCAAAGAAAATTGTTCGAAGTGGTAATAAACGTGGACGAGGGTCTAATGATCAAGGACGGGGTAAAAAGATGTCTAAAAGAATGTACAGTTCCAAACGAGATACTGGCCGCCGAAATGTAAAGGTCAATGAGAATCTAAGTGACAAGCTAAAACAGCAGGGACGAGTACTACAAGGATCAGCTGGTGGTCGTGGTCGCCGAACGGTAAGGAAACGGAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATACCGCAGTGAGTCATAGCCCCAATATTGACAGAGAACCATTGAGAAGATTTGATGAGGAGTGGGATGGTGAAAGGGCAAGTCCCATGACTCCCGTCCACATTGAAATTGATGACAATAGCAACAGTGCTGAAGAGGTGGAATCTGATGACAACGGCCAAGCAGTAGAATATGATCAAGGTAACTGGGAGGTGGGTTATAATGGCATTCCCGCCAACAGTTGGGGTAGGGACTTTGCTGGAATGAGTGATGAAGATGCGGATGCTTTTGAAGATGACAATGACAACAACAATGACAACGGCATTGAAGAGAACGAAGAAGAGGATTCGGAAGCAGATGTTATGAGTGAGGGTTCAGATGGCATGGCACATAGGGTCATAAATGAAGAAGGCTCAGACTCATCTGAATCTGAAGATTCCTATGATTAG 5271 0.4312 MEGEAASDAEIENNNTQKREDAVGDNSNENNNGSNSKIGNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSETMRAELSQKLGLSDRQLQMWFCHRRLKDKKDLPPKKQKKAVPAPVPVPVPVPAPPVPDSPPDLRLGPEQVNEYGSGSGSGSSPLTRPEFRNVVPRGGMLGYYEPPKAMMELRAIACVEAQLGQPLRDDGPILGVEFDPLPPGAFGAPIAVTEQQKRPSLAYDSKMYERHDVRTNKAMARTLPEYPFLPNQPGIRSDAFGQLNPPHLHDPIDGPSRTSFPINEQLHKIHATQSHSARVRVSSQQDKQVIPYSSPPREVDVALPRESYANIANAGIDSHFADHPIAGQENPYALPSGQVLQNDMTIRIEKKRKIDDAKIAKEVEAYETRMRKELEKQDNLRRKNEERLRKEMERQERERKKEEERLIRERQREEERSRREQRREIERREKFLMKEHLRAEKRRRKEELRKEKEAERRKAALEKAAARRIAKESMELIEDEQLELMELAATSKGLSSIIQLDLDTLQNLESFRDSLCFFPPKSVKLKRPFAIQPWIDSDQNVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVTLLKVIIKDIEDVARTPSTGLGISQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPKLKKRSITWSYANDKDEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRTAFRKDPADAESILSAARKKIQIFENGFPAGEDADDVEREESESDEVDEDPDVDDLVNPSSADPISGQFDEPNVSTPNGKENLDNDVKLDQNEFEMDLPCFVEDGYKEADCPGSVTEQPVVCEDLNTGNPDQDNMEIDESQSGESWVQGLAEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDTINKPDIPLLIANKVETHDTYPAAVEGSQSPMLDININTINIETSPGTAENQKPAPAAQSLHGEKSSLIQDLCTGTGPDHPQVQVPPQYSKRSRSQLKSYIAHIAEEMCIYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDGNWGLIDSEEALDILLAALDSRGIRESHLRLMLKRIEKSFKENVRRNTQCASAKIGSKDKFSIKSEENNGPYSTPDRHVGSDSPSSTLRNLNSDKLETSSSFKIELGESENEKKAAIQRYQXXXXXXXXXXXXXXYNSSILCATKYGKKRCKPLVDVCDLCLQPYFVEDSHCKSCHRTSATNNGFSFTKHAFHCGDKLHKNVSMESSLPLRTRLLKVLFACIEASVLPEAFGTIWTNDARKHWGVRLSKSSSVEELLQILALFEKALRRDFLSSNFSTTDELLGLSNMGGNASLTSTDPESVAVLPWVPQTTAAVSLRLLEIDSSINYVHLEIPEPCKEKEAKEYIKLPSRYTSFKCNREVEPAELGHGEFIKDKSASKKIVRSGNKRGRGSNDQGRGKKMSKRMYSSKRDTGRRNVKVNENLSDKLKQQGRVLQGSAGGRGRRTVRKRRVEKRAVEDLLLGHTAVSHSPNIDREPLRRFDEEWDGERASPMTPVHIEIDDNSNSAEEVESDDNGQAVEYDQGNWEVGYNGIPANSWGRDFAGMSDEDADAFEDDNDNNNDNGIEENEEEDSEADVMSEGSDGMAHRVINEEGSDSSESEDSYD 1756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00411 1756 ProSiteProfiles DDT domain profile. 569 628 IPR018501 -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 826 848 - -
Aip10g00411 1756 Gene3D - 30 105 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 265 291 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1687 1756 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1218 1244 - -
Aip10g00411 1756 PANTHER HOMEOBOX DOMAIN PROTEIN 16 709 - -
Aip10g00411 1756 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 933 977 IPR028942 -
Aip10g00411 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 709 1756 IPR044977 GO:0006357
Aip10g00411 1756 CDD homeodomain 49 98 IPR001356 GO:0003677
Aip10g00411 1756 SMART testlast3 569 628 IPR018501 -
Aip10g00411 1756 Pfam DDT domain 571 625 IPR018501 -
Aip10g00411 1756 PANTHER HOMEOBOX DOMAIN PROTEIN 709 1756 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1542 1568 - -
Aip10g00411 1756 Pfam Homeodomain 47 103 IPR001356 GO:0003677
Aip10g00411 1756 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Aip10g00411 1756 MobiDBLite consensus disorder prediction 112 135 - -
Aip10g00411 1756 Coils Coil 465 496 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 853 874 - -
Aip10g00411 1756 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 817 878 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1529 1568 - -
Aip10g00411 1756 Pfam HB1, ASXL, restriction endonuclease HTH domain 725 793 IPR007759 GO:0006355
Aip10g00411 1756 MobiDBLite consensus disorder prediction 145 159 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 26 53 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 101 162 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1215 1244 - -
Aip10g00411 1756 Coils Coil 394 459 - -
Aip10g00411 1756 Coils Coil 1258 1273 - -
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1 58 - -
Aip10g00411 1756 SUPERFAMILY Homeodomain-like 34 103 IPR009057 -
Aip10g00411 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 16 709 IPR044977 GO:0006357
Aip10g00411 1756 ProSiteProfiles HARE-type HTH domain profile. 725 794 IPR007759 GO:0006355
Aip10g00411 1756 SMART HOX_1 46 108 IPR001356 GO:0003677
Aip10g00411 1756 MobiDBLite consensus disorder prediction 1699 1729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00411 Aip-Chr10 4081750 4090297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00411 4 1682 Homeobox Transcription Factor Family AT1G28420 47.627 0.0 1260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aip10g00411 WSD 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00411 - - gmx:100777465 2302.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00411 10 4081750 4090297 Aip10g00411 10 4081750 4090297 ECH
Aip10g00411 10 4081750 4090297 Aip03g03825 03 120625088 120633447 ECH
Aip03g03825 03 120625088 120633447 Aip10g00411 10 4081750 4090297 PCT