Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00403 ATGCGTCCAATCTCAGTGTTGGTGGTTCTGGCGGTTCTATCAGCGGCAGCAGAGTCACTGAACCAAGAAGGACTGTTCCTGTATGAAATGAAGGTCGCCATGGAAGATCCTCATTCCACGCTCTCCAACTGGAACACCAGAGACTCCACTCCCTGCAACTGGTTCGGTGTCACCTGCCACTCCGACACCGTCGTCACCCTCGACCTCTCCTCCGCCAACCTCTTTGGCCCATTCCCCTCTCACTCCCTCTGCCGCCTCCGCAACCTCACCACCCTCATCCTCTTCAACAACTCCATCAACGACACTCTCCCCTCCGACATCTCCCTCTGCCGCTCCCTTCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGACCCCTCCCTCATTCTCTCTCCTTGCTCCCCAACCTCCGCCACCTCGACCTCGCCGGAAACAACTTCTCCGGCCCCATCCCTCCCTCCTTCGGAGCCTTCCAGAAACTCCAGGTCATCAGCCTCGTCTACAATCTTCTAGAAGGAACCATACCACCTTCCCTCGGCAACATCACCACCCTCAAGATGCTCAACCTCTCTTACAACCCATTTTCACCGGCTCCGATTGCGCCGGAGCTCGGTAACCTCACGAACCTTGAGGTTCTGTGGCTCACTCAGTGCAACCTCGTCGGTGAAATACCCGAATCACTCGGTAACCTCAAGAGCCTCGTCGACTTGGACCTTGCATTCAATAACCTCCACGGTTCCATTCCCGCTTCGCTCACCGGGTTGACTCGCCTGGTTCAGCTCGAGTTGTATAACAACTCGTTGTCCGGCGAGTTACCCAAGGGAATGTCGAACCTTACCTCCTTGAGGCTCGTTGATCTGTCCATGAACCACTTGGAAGGTGAACTTCCCGATGAGTTCTGCCGTTTGCCGCTCGAAAGTCTCAACCTTTACGAGAATCGCTTCCAAGGGAACTTGCCGGCGACCATTGCAAACTCGCCGAACCTCTATGAGTTGAGGTTGTTCGACAACAGGTTCACCGGGAAGTTGCCGGAGAATCTGGGGAAGAATGCGCCGTTGAGATGGATTGATCTCTCGACCAACCAGTTCTCCGGTCCCATTCCGGCCACTCTATGCGATCACGGCCAGTTGGAGGAGCTTCTGTTGATATATAACTCGTTTTCCGGCGAGGTTCCGGCGAGTCTTGGCGCATGCACGAGCTTAACGCGTGTAAGGCTCGGTTTCAACCGGTTTTCCGGCGACATTCCGGCGGGTTTGTGGGGTCTTCCTCACGTGTCTCTGCTTGAGCTTGTCGATAACTCGTTTTCTGGTTCAATCGCGAGTACCATTGCCGGAGCGAGGAATCTTTCACTGTTGAGGCTTTCAAAGAACGGTTTCGAGGGTCCAATCCCTCAAGAGATTGGATGGTTGGAAACTCTTCAGGAATTTTCTGGTGGCGATAACAAGTTCAATGGCTCGTTGCCCCAGAGTTTTGTGAATCTTGGTCAGCTTGGTACTCTTGATCTGCATAACAATAAGCTCAGTGGAGAGCTTCCCAATGAGATTAAATCATGGAAGAAACTGAACGAGTTGAATTTGGCTAACAATGAGATTGGTGGTGAAATCCCTAAGGAAATTGGTAGTTTGTCAGTGCTTAATTTTCTTGATCTTTCTAATAACAAGTTTTCTGGGAAAGTACCCATTGGTTTGCAGAATTTGAGGCTGAATGAGCTCAATTTGTCTCATAATCAGTTAAATGGAGAACTTCCCCCAATGTTGGCTAAGGATATGTACAAGGCTAGCTTTCTTGGTAACCCTGGTTTGTGTGGGGATTTGAAGGGTTTATGTAATGGAAGAGATAAGGATAAGAATAGAAGCTTTGTTTGGTTGCTTAGAACCATGTTCATTGTTGCCATTTTGGTGTTTGTTGTTGGTGTGGTATGGTTCTACTTCAAGTACAAGGGTTTCAAGAATGCAAGGGCTATTGATAAGTCAAAGTGGACACTGATGTCATTTCACAAATTGGGTTTTGATGAGGATGAGATCTTGAACTGCCTTGATGAAGATAATGTGATAGGAAGCGGATCTTCTGGGAAAGTCTACAAGGTTGTGCTTAGCAATGGTGAAGCTGTCGCCGTGAAGAAGATATGGGAAGGGGTTAAGAAGGAAATAGAATGTGGTGGAGATGTCGAAAATGGCCGCTTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACATTGGGTAAAATTAGGCACAAGAACATTGTGAAGCTCTGGTGCTGCTGCACCACAAGGGATTGCAAGCTGTTAGTTTATGAGTACATGCCGAATGGAAGCCTTGGTGATTTGCTGCATAGCAGCAAAGGAGGGTTGTTGGATTGGCCAACCAGGTACAAGATAGCGGTTGATGCCGCAGAAGGCCTCTCTTATCTGCACCATGATTGTGTTCCTCCAATTGTACATAGAGACGTGAAATCTAACAATATCTTGCTGGATGGAGAGTTTGGTGCAAGGGTAGCAGATTTCGGAGTAGCTAAGGTTGTCGAAACCACCGGAAAAGGAACAAAATCCATGTCTGTCATAGCAGGGTCTTGTGGATATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGCTTTGGTGTTGTGATACTAGAGTTGGTTAGTGGAAGGAGGCCGGTAGACCCTGAATTTGGGGAAAAGGACTTGGTTTCATGGGTTTGCACAACCTTGGATCAAAAAGGTGTGGAGCATGTGGTTGACTCAAGGCTAGATTCTTCTTTCAAACAAGATATATGTAAGGTGCTCAACATTGGCCTTGTGTGCACAAGCCCCCTCCCAATAAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGCTTGGCACCACCACCCCCCCTTACCCCCACAGATATCAACAGAACAAAGTCAACCAAGAATGA 2949 0.4886 MRPISVLVVLAVLSAAAESLNQEGLFLYEMKVAMEDPHSTLSNWNTRDSTPCNWFGVTCHSDTVVTLDLSSANLFGPFPSHSLCRLRNLTTLILFNNSINDTLPSDISLCRSLLHLDLSQNLLTGPLPHSLSLLPNLRHLDLAGNNFSGPIPPSFGAFQKLQVISLVYNLLEGTIPPSLGNITTLKMLNLSYNPFSPAPIAPELGNLTNLEVLWLTQCNLVGEIPESLGNLKSLVDLDLAFNNLHGSIPASLTGLTRLVQLELYNNSLSGELPKGMSNLTSLRLVDLSMNHLEGELPDEFCRLPLESLNLYENRFQGNLPATIANSPNLYELRLFDNRFTGKLPENLGKNAPLRWIDLSTNQFSGPIPATLCDHGQLEELLLIYNSFSGEVPASLGACTSLTRVRLGFNRFSGDIPAGLWGLPHVSLLELVDNSFSGSIASTIAGARNLSLLRLSKNGFEGPIPQEIGWLETLQEFSGGDNKFNGSLPQSFVNLGQLGTLDLHNNKLSGELPNEIKSWKKLNELNLANNEIGGEIPKEIGSLSVLNFLDLSNNKFSGKVPIGLQNLRLNELNLSHNQLNGELPPMLAKDMYKASFLGNPGLCGDLKGLCNGRDKDKNRSFVWLLRTMFIVAILVFVVGVVWFYFKYKGFKNARAIDKSKWTLMSFHKLGFDEDEILNCLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKIWEGVKKEIECGGDVENGRFQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVVETTGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRRPVDPEFGEKDLVSWVCTTLDQKGVEHVVDSRLDSSFKQDICKVLNIGLVCTSPLPINRPAMRRVVKMLQELGTTTPPYPHRYQQNKVNQE 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00403 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 972 - -
Aip10g00403 982 Gene3D Phosphorylase Kinase; domain 1 663 767 - -
Aip10g00403 982 PANTHER LRR RECEPTOR-LIKE KINASE 4 972 - -
Aip10g00403 982 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Aip10g00403 982 Gene3D Ribonuclease Inhibitor 133 199 IPR032675 -
Aip10g00403 982 SMART serkin_6 679 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00403 982 Pfam Leucine rich repeat 87 147 IPR001611 GO:0005515
Aip10g00403 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Aip10g00403 982 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Aip10g00403 982 Pfam Leucine Rich Repeat 209 231 IPR001611 GO:0005515
Aip10g00403 982 Gene3D Ribonuclease Inhibitor 200 304 IPR032675 -
Aip10g00403 982 Gene3D Ribonuclease Inhibitor 305 611 IPR032675 -
Aip10g00403 982 Gene3D Ribonuclease Inhibitor 25 132 IPR032675 -
Aip10g00403 982 SUPERFAMILY RNI-like 67 372 - -
Aip10g00403 982 SUPERFAMILY RNI-like 305 588 - -
Aip10g00403 982 ProSiteProfiles Protein kinase domain profile. 679 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00403 982 SUPERFAMILY Protein kinase-like (PK-like) 674 961 IPR011009 -
Aip10g00403 982 Gene3D Transferase(Phosphotransferase) domain 1 768 977 - -
Aip10g00403 982 SMART LRR_typ_2 207 231 IPR003591 -
Aip10g00403 982 SMART LRR_typ_2 86 110 IPR003591 -
Aip10g00403 982 SMART LRR_typ_2 134 160 IPR003591 -
Aip10g00403 982 SMART LRR_typ_2 279 303 IPR003591 -
Aip10g00403 982 SMART LRR_typ_2 494 517 IPR003591 -
Aip10g00403 982 SMART LRR_typ_2 255 278 IPR003591 -
Aip10g00403 982 Pfam Protein kinase domain 681 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00403 Aip-Chr10 4039520 4043151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00403 19 978 Receptor kinase-like Gene Family AT1G28440 69.048 0.0 1380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip10g00403 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00403 - - gmx:100819887 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00403 10 4039520 4043151 Aip10g00403 10 4039520 4043151 ECH
Aip10g00403 10 4039520 4043151 Aip03g03828 03 120716325 120720310 ECH