Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00402 ATGGACCATGCCAAGATTGCTTATGATTTAGTCATGGTGGCTCTATCCATATCTCTTATAGTTCTTGGTGTTGTTCTGTTTCTTGCATGCAAGAAAAAGCCGGTTGAATCCGAGGAAACACTTCCGGTAAAATTTTGTGCTCGTGCATACCCTTTAATGGAACTTGATGCTGCCACTGATGGCTTCAACCATAGGAGAATTGTTGGCCAGGGTCGCCTAGGAACAGTTTACGCCGCAACGCTATCGAATGCAGAGGTTGTAGCTGTGAAGAGGATCCACCCTTTTCTTGTTTTGAGCAATGCAGGCTTTGGATTCTCATCTGTGTTGAAGTGGCTCTCATTGGCACAACACCCCAACAGGTTTAGAATTGCAGCAGGTGTAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTAGCACCAAACATAGTACATGGTTGTGTTAAGTCTTCTAATGTTCTTATTGATGTGAATTTCTGTGCCAGGGTTTGTGATTATGGACTTAACTTCTTGGCACCAATGGAGAAGAGAGGGGTAGTGGGGTATGTGGATGGTGAGTATTGGAATGAGAGAGGGCGTGGTGCTACTAAAGAGAGTGATGTTTATGGTTTAGGTGTGGTGCTTTTGGAGCTTCTAAGTGGAAGAGGGTGTGAGGGAGGGTCATTGGCAAATTGGGCATTGCCTTTGATTAAGGAAATGAGTTTTGGTCAAGTTTTAGATCCCAGGCTTGTGACTCCTTCTGATATGAGTCCTTTGGTTAGATTGGCCAAAGTTGCTTCTGCTTGTGTTGGTAATCCAAGAAAGTGTAGGCCTAGTGTTGCTCAAGTTGCTACCATTTTGAACGATTTAGAAATACAAGTGTgtggaaactcagttgcagtcgacttcacgtga 891 0.4254 MDHAKIAYDLVMVALSISLIVLGVVLFLACKKKPVESEETLPVKFCARAYPLMELDAATDGFNHRRIVGQGRLGTVYAATLSNAEVVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNRFRIAAGVARGLQYLHEVVAPNIVHGCVKSSNVLIDVNFCARVCDYGLNFLAPMEKRGVVGYVDGEYWNERGRGATKESDVYGLGVVLLELLSGRGCEGGSLANWALPLIKEMSFGQVLDPRLVTPSDMSPLVRLAKVASACVGNPRKCRPSVAQVATILNDLEIQVCGNSVAVDFT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00402 296 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 120 288 - -
Aip10g00402 296 SUPERFAMILY Protein kinase-like (PK-like) 38 279 IPR011009 -
Aip10g00402 296 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 122 - -
Aip10g00402 296 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00402 296 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 122 - -
Aip10g00402 296 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 120 288 - -
Aip10g00402 296 Gene3D Transferase(Phosphotransferase) domain 1 52 292 - -
Aip10g00402 296 Pfam Protein kinase domain 122 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00402 296 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00402 Aip-Chr10 4032659 4033923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00402 47 289 Receptor kinase-like Gene Family AT3G59420 33.887 9.65e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip10g00402 Pkinase 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00402 - - adu:107468261 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00402 10 4032659 4033923 Aip10g00402 10 4032659 4033923 ECH