Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip10g00402 | ATGGACCATGCCAAGATTGCTTATGATTTAGTCATGGTGGCTCTATCCATATCTCTTATAGTTCTTGGTGTTGTTCTGTTTCTTGCATGCAAGAAAAAGCCGGTTGAATCCGAGGAAACACTTCCGGTAAAATTTTGTGCTCGTGCATACCCTTTAATGGAACTTGATGCTGCCACTGATGGCTTCAACCATAGGAGAATTGTTGGCCAGGGTCGCCTAGGAACAGTTTACGCCGCAACGCTATCGAATGCAGAGGTTGTAGCTGTGAAGAGGATCCACCCTTTTCTTGTTTTGAGCAATGCAGGCTTTGGATTCTCATCTGTGTTGAAGTGGCTCTCATTGGCACAACACCCCAACAGGTTTAGAATTGCAGCAGGTGTAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTAGCACCAAACATAGTACATGGTTGTGTTAAGTCTTCTAATGTTCTTATTGATGTGAATTTCTGTGCCAGGGTTTGTGATTATGGACTTAACTTCTTGGCACCAATGGAGAAGAGAGGGGTAGTGGGGTATGTGGATGGTGAGTATTGGAATGAGAGAGGGCGTGGTGCTACTAAAGAGAGTGATGTTTATGGTTTAGGTGTGGTGCTTTTGGAGCTTCTAAGTGGAAGAGGGTGTGAGGGAGGGTCATTGGCAAATTGGGCATTGCCTTTGATTAAGGAAATGAGTTTTGGTCAAGTTTTAGATCCCAGGCTTGTGACTCCTTCTGATATGAGTCCTTTGGTTAGATTGGCCAAAGTTGCTTCTGCTTGTGTTGGTAATCCAAGAAAGTGTAGGCCTAGTGTTGCTCAAGTTGCTACCATTTTGAACGATTTAGAAATACAAGTGTgtggaaactcagttgcagtcgacttcacgtga | 891 | 0.4254 | MDHAKIAYDLVMVALSISLIVLGVVLFLACKKKPVESEETLPVKFCARAYPLMELDAATDGFNHRRIVGQGRLGTVYAATLSNAEVVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNRFRIAAGVARGLQYLHEVVAPNIVHGCVKSSNVLIDVNFCARVCDYGLNFLAPMEKRGVVGYVDGEYWNERGRGATKESDVYGLGVVLLELLSGRGCEGGSLANWALPLIKEMSFGQVLDPRLVTPSDMSPLVRLAKVASACVGNPRKCRPSVAQVATILNDLEIQVCGNSVAVDFT | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip10g00402 | 296 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 | 120 | 288 | - | - | |
Aip10g00402 | 296 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 279 | IPR011009 | - | |
Aip10g00402 | 296 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 | 3 | 122 | - | - | |
Aip10g00402 | 296 | ProSiteProfiles | Protein kinase domain profile. | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip10g00402 | 296 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 3 | 122 | - | - | |
Aip10g00402 | 296 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 120 | 288 | - | - | |
Aip10g00402 | 296 | Gene3D | Transferase(Phosphotransferase) domain 1 | 52 | 292 | - | - | |
Aip10g00402 | 296 | Pfam | Protein kinase domain | 122 | 214 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip10g00402 | 296 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip10g00402 | Aip-Chr10 | 4032659 | 4033923 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip10g00402 | 47 | 289 | Receptor kinase-like Gene Family | AT3G59420 | 33.887 | 9.65e-39 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Aip10g00402 | Pkinase | 3.6e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip10g00402 | - | - | adu:107468261 | 539.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip10g00402 | 10 | 4032659 | 4033923 | Aip10g00402 | 10 | 4032659 | 4033923 | ECH |