Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00391 ATGGCTTCTTCTAACAGACACTGGCCAAGCATGTTTAAGTCCAAGCCCACATGGCAGCATGATATCACTATCACCGCCACTTCTTCTTCTTCTTCTAGTACTAGTAGTAGTAGTAGAACCTCTCCTTACTCTTGCGACGACAGAAGCCCTGAGCCCAAGCCCAGGTGGAACCCAAAGCCCGAGCAGATTCGGATCCTGGAGTCCATATTCAACTCTGGGATGGTCAACCCTCCCAGGGATGAGATCAGGAAGATAAGGGCTCAGTTGCAAGAGTACGGTCAAGTTGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGCAAGTCTAGAACCAAACACAAGCTCCGCCACCTCCACACCAAGAATAACCCTCCTCCTCCACCTCCTCCGTCATCCACCTCATCCTCCTCCTCTGACAAGTCATCATCCCCACCCACTACTACTACTACTACTACTTCTGCTGCTACTACCAATACCTATTTCTATACCCACAATCACACCGCCACTATTCCACCACCACCACCGCCGCCGCACGTGGCCGCTGAGACTTTCATCTTCCCGCTGCAACATCATCAAGGTAACAGTACTACTACTACTATAACATCATCCCCGCAAGGCCTTTTCTTCTCTGAGCTCTCCAATGTGGTGCAAGCTCATCATCATCAGCCGTCTCCACCACCACCTCATCAGCTCATGATGCATAACGTCGTTGGTCCCTGCACTAGTCTCTTGCTTAGTGAGATCATGATGAATAATGCTTCAAAGAAAGATCATCATCAAGAACATGCCAGCAGCAATAAGTCCCTCAAATTAATGCACCATGGCGGCGGCCACCACCACACACCAAAGCTTAGTTTCTGCGTCACTCCACCTACTACTACAACCGCCACTCTCGTCCCTCCCACCACCACACCATCACTCCTCACTCAAGGTAACATGAATACTATTCAAACTTATGCAGTAGGCACTGGAGATGGAAGTGAGAAAATAACGGTGTTCATAAATGATGTGGCGTTTGAGGTGGCGGCGGGGCCATTCAATGTAAGGGAGGCATTTGGGGAGGATGCAGTCCTGATTCACGCCATCACTGGTCAACCTCTTCTCACTAACCAATGGGGTCTTACCCTCCACTCTCTCCACCATGGCGCTTCTTATTATCTGCTTCTACATACCCTCCCTCACGCACCTTATTAG 1194 0.4983 MASSNRHWPSMFKSKPTWQHDITITATSSSSSSTSSSSRTSPYSCDDRSPEPKPRWNPKPEQIRILESIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRTKHKLRHLHTKNNPPPPPPPSSTSSSSSDKSSSPPTTTTTTTSAATTNTYFYTHNHTATIPPPPPPPHVAAETFIFPLQHHQGNSTTTTITSSPQGLFFSELSNVVQAHHHQPSPPPPHQLMMHNVVGPCTSLLLSEIMMNNASKKDHHQEHASSNKSLKLMHHGGGHHHTPKLSFCVTPPTTTTATLVPPTTTPSLLTQGNMNTIQTYAVGTGDGSEKITVFINDVAFEVAAGPFNVREAFGEDAVLIHAITGQPLLTNQWGLTLHSLHHGASYYLLLHTLPHAPY 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00391 397 MobiDBLite consensus disorder prediction 112 155 - -
Aip10g00391 397 MobiDBLite consensus disorder prediction 254 268 - -
Aip10g00391 397 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 389 IPR044557 GO:0003700|GO:0050793
Aip10g00391 397 MobiDBLite consensus disorder prediction 254 275 - -
Aip10g00391 397 MobiDBLite consensus disorder prediction 19 45 - -
Aip10g00391 397 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Aip10g00391 397 SMART HOX_1 51 118 IPR001356 GO:0003677
Aip10g00391 397 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Aip10g00391 397 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Aip10g00391 397 MobiDBLite consensus disorder prediction 134 155 - -
Aip10g00391 397 MobiDBLite consensus disorder prediction 19 61 - -
Aip10g00391 397 CDD homeodomain 52 114 IPR001356 GO:0003677
Aip10g00391 397 Gene3D - 24 113 - -
Aip10g00391 397 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00391 Aip-Chr10 3916155 3917405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00391 1 392 Wox Gene Family AT2G33880 44.104 6.91e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip10g00391 Homeodomain 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00391 - - aip:107619964 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00391 10 3916155 3917405 Aip10g00391 10 3916155 3917405 ECH