Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00383 ATGGGTTCAGGCGATTGGTTTAAGACATTAATTTCGAGAAAATCAAAAGAAAGAAAACCCAAGAAAGGAAAGGGTACTTTAGCTTCAGCGAAATTAAGTGCACTGAACTCAAATGATTGTACAAGAAGAGACTCTAGTGACTTAGCAAATGGTGCTAAAGCTGAAAATATTGGGTCAGTTGAAACTATTGCTGCAACAAGAATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAGGCTCTACGCCGCTTGAAAGGTATCACAAAACTGCAAATTGTAACACAGAGTTACTCGGTTAAAAAGCAAGCCAATACTGCTATAACTTACCTTCATTCATGGAGCAAGATACAGACTGAGATTAGAGCTCGAAGAATCTGTATGGTGACTGAAGACAGGATCAGGCGGAAGAAACTAGAATCTCAGCTTAAACTTGAGGCAAAGCTCCATGATCTAGAGGTTGAATGGTGTAGTGGTTCTGAAACCATGGAGGAAGTTGTTGGAAGGATACATCAGAGAGAAGAAGCAGCTGTCAAGCGTGAAAGAGCTATGGCATATGCTTTTTCTCATCAGTGGAGGGCCAACTGTAGTCAGAGCCAAGGGCTAGGAAACTGTGAACTTGGTAAAGCTAATTGGGGTTGGAGCTGGAAGGCACGCTGGATCGCTGCTCGGCCGTGGGAAAGCCGTGTTACCACTGTGTCCAGTGATGCAAAGAAAGCTCAGAATAAGAAGGATAAGAAGACATCAACACCAAAAACACCTGTTTTGGCAAAACCAGCTTCCACCAATCCAAAAGGGACCCCTCCTTTGGCAAATGCTAAAGGGCTCCTAGCCTTGGCACAACGGCTCAGACTTCACAAGCCCCCACCATTCTCTGAGGACATGTTAGAAAAGATCATGGAAGAAAGCAAAGGCAAGGTTGTTTCCCGAGTCGGTTTCCCGGAATCAGCCACTGCAATTGCTCAAAACCAAGGAGAATTTAGATTCAAGAGAGCTGCTGTTTTGATCTGCATCTTCGAAGGCGACGCAGGGGAACTACGAGTGATCCTCACCAAGCGATCTTCCAAGCTCTCTATGTACTCAGGTGAAGTGGCCTTGCCTGGTGGTAAGGCAGAAGAAGGTGATAATGATGATGGAGACACTGCAAAAAGAGAGGCAATGGAGGAAGTTGGGTTGGACCCTCAACTTGTTGATGTTGTTACATTTCTTGAACCATTCTTCTCTAAGTACCTCATAATAGTGGTTCCTGTCATTGGCATACTTCATGACAAAAAAGCATTCAAGCCAGCTCCAAACCCTGCTGAAGTAGAAGCTGTATTTGATGTACCTTTGGAAATGTTTCTCAAGGATGAGAAGAGGAAACAAGAAGAGAGGATATGGATGGGAGAGAAGTATGTGATACATTTATTTGAATATGAAATTGAGCACAAGAAATACCTCATATGGGGTTTAACAGCTGGCATGTTGATAAGGGCTGCATCAGTTGTGTATCAACGGCCACCAGCTTTCTTGGAGCTCAATCCTATAATGATTCCTAGGGATGGGAAAATGGAATCACACAGTGCTGAGGTACGAGGTTCACAGAGACTACAAGCTTTGCTTCATCATTTCCAACCTTCCATAACCAACAACCCCCACAACTTGAAGCGCAGCCATTTCACCTCGAAACCGACCAAGAGAGCTGCGGTTCTGATCTGTCTCTTCGAAGGTTCCGATGGGAATCTTAGAGTGATCCTCACTTTAAGGGCTTCTTCTCTCTCACGCCATTCCGGTGAGGTTGCTCTGCCAGGTGGCAAGAGGGAAGAAGGTGATGCTGATGATGTAGAAACCGCTTTGAGGGAGGCTAAGGAGGAAATTGGATTGGACCCTTCTCTTGTTTCTGTTATTACTCTTCTTGAACCCTTTCATACTAAGGTATGCACTTCTAGAAATTTAGCTGCATTTCTTTTTTCCTCAATTTTGTTTACTTTACAAAGTGATTTTAATTTGCAGTATGGCATAACAGTAATACCTGTGGTGGGAATTTTGTCCAACAAGGATGCATTTTCACCGGTTTTAGATTCAGCTGAAGTTGAAGCAATATTTGATGTTCCATTGGAGTTGTTCCTCAAGAATGAGAATAGGAGAGCTGAGGAAAGAGAATGGATGGGAGAGAAGCATCTTGTACATTATTTTGATTATGAATTTGAGAATACACAGTATGTGATATGGGCTATAACTGCTGCTATCTTGATCAGGGCAGCTACCGTTTTACTTCAGCGGCCGCCGGAGTTTCTAGAGCAGAGGCCTAAAATCTGGGGAGGAATTACTGAAAACGACATGATAATGTTACAGAATAGTTCCAAGTAG 2346 0.4356 MGSGDWFKTLISRKSKERKPKKGKGTLASAKLSALNSNDCTRRDSSDLANGAKAENIGSVETIAATRIQTAFRAYKARKALRRLKGITKLQIVTQSYSVKKQANTAITYLHSWSKIQTEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCSGSETMEEVVGRIHQREEAAVKRERAMAYAFSHQWRANCSQSQGLGNCELGKANWGWSWKARWIAARPWESRVTTVSSDAKKAQNKKDKKTSTPKTPVLAKPASTNPKGTPPLANAKGLLALAQRLRLHKPPPFSEDMLEKIMEESKGKVVSRVGFPESATAIAQNQGEFRFKRAAVLICIFEGDAGELRVILTKRSSKLSMYSGEVALPGGKAEEGDNDDGDTAKREAMEEVGLDPQLVDVVTFLEPFFSKYLIIVVPVIGILHDKKAFKPAPNPAEVEAVFDVPLEMFLKDEKRKQEERIWMGEKYVIHLFEYEIEHKKYLIWGLTAGMLIRAASVVYQRPPAFLELNPIMIPRDGKMESHSAEVRGSQRLQALLHHFQPSITNNPHNLKRSHFTSKPTKRAAVLICLFEGSDGNLRVILTLRASSLSRHSGEVALPGGKREEGDADDVETALREAKEEIGLDPSLVSVITLLEPFHTKVCTSRNLAAFLFSSILFTLQSDFNLQYGITVIPVVGILSNKDAFSPVLDSAEVEAIFDVPLELFLKNENRRAEEREWMGEKHLVHYFDYEFENTQYVIWAITAAILIRAATVLLQRPPEFLEQRPKIWGGITENDMIMLQNSSK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00383 781 PANTHER NUDIX HYDROLASE 549 637 IPR045121 GO:0010945
Aip10g00383 781 PANTHER NUDIX HYDROLASE 274 324 IPR045121 GO:0010945
Aip10g00383 781 PANTHER NUDIX HYDROLASE 654 773 IPR045121 GO:0010945
Aip10g00383 781 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 549 637 - -
Aip10g00383 781 ProSiteProfiles Nudix hydrolase domain profile. 328 462 IPR000086 -
Aip10g00383 781 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 654 773 - -
Aip10g00383 781 Coils Coil 597 617 - -
Aip10g00383 781 MobiDBLite consensus disorder prediction 1 28 - -
Aip10g00383 781 SUPERFAMILY Nudix 546 743 IPR015797 -
Aip10g00383 781 MobiDBLite consensus disorder prediction 230 268 - -
Aip10g00383 781 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 274 324 - -
Aip10g00383 781 CDD CoAse 558 744 IPR045121 GO:0010945
Aip10g00383 781 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Aip10g00383 781 SUPERFAMILY Nudix 324 491 IPR015797 -
Aip10g00383 781 PANTHER NUDIX HYDROLASE 326 507 IPR045121 GO:0010945
Aip10g00383 781 CDD CoAse 329 489 IPR045121 GO:0010945
Aip10g00383 781 Pfam NUDIX domain 558 643 IPR000086 -
Aip10g00383 781 Pfam NUDIX domain 329 452 IPR000086 -
Aip10g00383 781 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 313 493 - -
Aip10g00383 781 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 534 748 - -
Aip10g00383 781 ProSiteProfiles Nudix hydrolase domain profile. 557 739 IPR000086 -
Aip10g00383 781 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 326 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00383 Aip-Chr10 3811421 3817816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00383 1 263 IQD Protein Family AT2G33990 50.570 1.92e-74 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00383 - K17879 csin:114308864 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00383 10 3811421 3817816 Aip10g00383 10 3811421 3817816 ECH
Aip10g00383 10 3811421 3817816 Aip03g03853 03 121138819 121140668 ECH