Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00379 ATGGAAGAAGCTGCTTCAAACACCATCAAAATCTCCCAACGCACTCTCGTCTTCCCTTCTCGCACTCCCTTCTCCCAAAACCACGCCCTCCCTCTCTCCCCCCTCGACAACGACCCCAACCTCCGCCTCACTTTCCGCTACCTCCGCCTCTACATTTCCTCCCACCCCGACCCCTACGCCCTCATCTCCTCCTCCCTCTCCCAAGCTCTTTTTCACTACTACCCACTCGCCGGCACGCTTCGCTACCGTCTACATGACAACCGCCTCGAGAACTGGTGCGCTGCCGGTCAGGGAGTTCCCCTCATTCTTGCCACCGCCGCAGACATCACCCTCGAATCGGTAAACTACCTCGACGACCCGGATTTCAGCTTCATTGAGCAGTTAGTACCCGATCCGGGACCCGATGAGGGGATGGAGCACCCCTGCATACTCCAAATAACGGTGTTTGGGTGCGGTGGGTTCACGCTGGGTGCTGCCATGCACCACGCGCTTAACGACGGTATGGGCGGGAGCTTGTTCTTTAATGCGGTGGCCGAGTTGGCTCGCGGGTCGAGTCGGATATCGGTTGAACCGGTTTGGAACCGTGAGGTATTGTTGGGAGCGAGGAACCCGCCCCGGGTGGAGTCAGCGTTGGTAGGAGAGTTTCTGAGTTTGAAGAAGGGGGTTTTGCCGTACCAAGCGGACGCCGGTGATGTTGTGAGGGAGTGCTTCCACGTTCAGGAGGAGTCCTTGGAAGCGTTCAGGAGATCACTGTTTGAACAATCCGGTCTCAAATTCACCACTTTTGAGGTTCTTGCTGCTTACGTTTGGAGGTCCAAGGTTAGGGCGTCGGAAATGAAGGACAATGAGAAGGTTAAGTTGGCATACTCGGTTAACATACGAAAAGTGGTAAAGCCAACACTGCCAGATGGGTATTGGGGTAACGGTTGCGTTCCAATGTATGTTGAGGTGAGTGTGAAGGATTTAATAGAGAGGCCCATTTGGGAAACAGCGGAGCTAATCAAGAAGAGCAAGAGCAACGTGAGTGATGAGTATGTTCGGTCATTCATCGATTTTCAGGCAAAGCATTATGGGGATGGGATCACGGCAGGGAAAGGGGTTACTGGGTTCACCGATTGGAGACACTTGGGCCACTCGTCTGTGGACTTTGGATCCGGAGGCCCAGTTACTGTTTTGCCACTTGGCAGGAACCTCCTTGGAAGTGTTCACCCTTGCTTCTTCTTGCCTTATTCAACTGCCACTAAGAAGAAGGGTTTCAAGGTTTTGGTCACTCTGCCTCAACCCGCTTTGCCTGTTTTTCGAGAGGATATGCACGTTTTTTCCCCCTAG 1329 0.5372 MEEAASNTIKISQRTLVFPSRTPFSQNHALPLSPLDNDPNLRLTFRYLRLYISSHPDPYALISSSLSQALFHYYPLAGTLRYRLHDNRLENWCAAGQGVPLILATAADITLESVNYLDDPDFSFIEQLVPDPGPDEGMEHPCILQITVFGCGGFTLGAAMHHALNDGMGGSLFFNAVAELARGSSRISVEPVWNREVLLGARNPPRVESALVGEFLSLKKGVLPYQADAGDVVRECFHVQEESLEAFRRSLFEQSGLKFTTFEVLAAYVWRSKVRASEMKDNEKVKLAYSVNIRKVVKPTLPDGYWGNGCVPMYVEVSVKDLIERPIWETAELIKKSKSNVSDEYVRSFIDFQAKHYGDGITAGKGVTGFTDWRHLGHSSVDFGSGGPVTVLPLGRNLLGSVHPCFFLPYSTATKKKGFKVLVTLPQPALPVFREDMHVFSP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00379 442 Pfam Transferase family 9 438 - -
Aip10g00379 442 Gene3D - 224 436 IPR023213 -
Aip10g00379 442 Gene3D - 8 212 IPR023213 -
Aip10g00379 442 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 9 440 - -
Aip10g00379 442 PANTHER ACYL TRANSFERASE 4 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00379 Aip-Chr10 3801958 3803366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00379 61 395 Monolignol Biosynthesis Gene Families AT5G48930 28.818 2.51e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00379 - - gmx:100817021 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00379 10 3801958 3803366 Aip10g00379 10 3801958 3803366 ECH