Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00366 ATGCATACTCCTCCTCCTCCATCATCATCTTCTTCTTCTTCTAATTCTATTTGGGTATTGTCTAGCATAAAGCTTCAATTCTTTGCACGAATCAGAAGGTTCCTCCAATCAAAAGCGACACGAAAGCGCCGAAACCAACCAAGAAACAGAGCTGAGCAGAACAACAACGACAATAACAAGGTCGAAAAAGTTGTTGAAACGGTTCAAGTCATGGAGAAGCATGAGGAGGAGAAGGAAGAAGAGGAGGACTCTGCTATCATGTTGCAGAGGACAGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTGGCAGCCAAGGATATTGGAAATTTGGCAAAAGAAGATTTGAAGGTTAGAAAGTTGATAACAGAACTCGGTGTGGTGCCTGTGTTGGTCTCTATGGTGGCTTCCGACGTGGCCACCCGTCGCAGAGCGGCGTTGGTGGCGTTGATCCACCTTGCTGATGGAACTTAcacGAACAAGGCTATGATAGTGGAGGCAGGAATATTATCCAAGCTGCCAAACACAGTTGACAATGTAGATGAATCAACAATCAATGAATTTTCTGAGTTGCTGTTATCGTTGTCTTCACTAGCAAACACCCAATTCCATTTTCCTTCATTGGACTTTCTACCATCACTAAGACACATTCTTGAGTCAAACTCATCAAGCTTAGACACAAAAACATCATGTTTGGGTGCCCTATACAACTTTTCAAGCGTGTTAGAGAACGCGGGAGCTTTGGTTTCATGTGGGATTGTTCCTATTTTATTAGAACTATCCTCAAGAAAAGAAACTTCAGAGAAAGCATTGGCAAGTCTAGGGAACTTGTTAGTGAGCATGATGGGGAAGAAAGCAATAGAGAATAGTTGTTTAGTGCCAAAGAACTTCATTGAGATCTTGTCATGGGAAGACAAACCGAAATGCCAAGAGTTATCGGTTTATATATTGATGATCCTAGCGCATCAAAGTTCAAGTCAAAGGGAGAAAATGGCACAGGCTGGCATTGTTCCTGTGCTTCTTGAAGTGGTTCTGTTGGGAAGCTCTTTGGCTCAGAAGAGAGCATTGAAGCTATTGCAATGGTTCAAGGATGAGAGGCAAACCAAGATGGGGCCACATTCGGGGCCACAAACACCGAGGTTTGCATCGATGGGGTCACCGGTGAATCAAAGAGAAGCAACGGAAGGGAAGAAGATGATGAAGAGTTTGGTTAAACAAAGCTTGCATAGGAACATGGAGATTATTACTCACAGGGCTAATGCTGCTGGAGACTCTTCTAGATTTAAGTCATTGGTTATTAGCACTAGTTCTAAGAGTTTGCCTTATTAA 1335 0.4307 MHTPPPPSSSSSSSNSIWVLSSIKLQFFARIRRFLQSKATRKRRNQPRNRAEQNNNDNNKVEKVVETVQVMEKHEEEKEEEEDSAIMLQRTVKKLHFGSWEEKEVAAKDIGNLAKEDLKVRKLITELGVVPVLVSMVASDVATRRRAALVALIHLADGTYTNKAMIVEAGILSKLPNTVDNVDESTINEFSELLLSLSSLANTQFHFPSLDFLPSLRHILESNSSSLDTKTSCLGALYNFSSVLENAGALVSCGIVPILLELSSRKETSEKALASLGNLLVSMMGKKAIENSCLVPKNFIEILSWEDKPKCQELSVYILMILAHQSSSQREKMAQAGIVPVLLEVVLLGSSLAQKRALKLLQWFKDERQTKMGPHSGPQTPRFASMGSPVNQREATEGKKMMKSLVKQSLHRNMEIITHRANAAGDSSRFKSLVISTSSKSLPY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00366 444 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 77 444 - -
Aip10g00366 444 MobiDBLite consensus disorder prediction 38 60 - -
Aip10g00366 444 Coils Coil 64 91 - -
Aip10g00366 444 SMART arm_5 117 157 IPR000225 GO:0005515
Aip10g00366 444 SMART arm_5 159 199 IPR000225 GO:0005515
Aip10g00366 444 SMART arm_5 242 281 IPR000225 GO:0005515
Aip10g00366 444 Gene3D - 51 379 IPR011989 -
Aip10g00366 444 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 77 444 - -
Aip10g00366 444 SUPERFAMILY ARM repeat 92 364 IPR016024 -
Aip10g00366 444 MobiDBLite consensus disorder prediction 373 390 - -
Aip10g00366 444 MobiDBLite consensus disorder prediction 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00366 Aip-Chr10 3633160 3636795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00366 77 412 U-box Gene Family AT1G27910 26.437 4.45e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00366 - - adu:107468248 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00366 10 3633160 3636795 Aip10g00366 10 3633160 3636795 ECH