Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00364 ATGGATTCCAATGAAGTGAAAGTTGAAGCAACTGAAGAAGGAGATGGATCATCAATGTCTTACAGGGCAACCGTGTGCTGCGAATACCCGCCTGATCTGCTATCTGATCTAAGACAAACATTTGATGGCCTCCAACTTCAATTGGTGAGTGCACAAGTATCCACTCTGGGAGACAGAGTGAAGAATGAAGTTGTGTATACTTGTTACTGCAAAGGGGATATGATGAGTAGTGTTGAGGCATGCCAAGTTCTTGCAAGGAATCTTCATCAGTCACTGTCTTCTCTACTCACCTCACATCCAATCCACAATAGAAGACTACGCTGTCTTCAAACATCTGCTGTCTCATGCTACAATTAA 357 0.4314 MDSNEVKVEATEEGDGSSMSYRATVCCEYPPDLLSDLRQTFDGLQLQLVSAQVSTLGDRVKNEVVYTCYCKGDMMSSVEACQVLARNLHQSLSSLLTSHPIHNRRLRCLQTSAVSCYN 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00364 118 PANTHER DNA BINDING PROTEIN-LIKE 1 99 - -
Aip10g00364 118 CDD ACT_UUR-ACR-like 24 60 - -
Aip10g00364 118 PANTHER TRANSCRIPTION FACTOR BHLH30 1 99 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00364 Aip-Chr10 3624990 3625346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00364 2 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 32.710 2.60e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00364 - - ahf:112783609 233.032