Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00340 ATGGGAATGAGATGGAACATATTTAGATTTTGGCTCAGAATTTATGTTTGCTTAATTGCTCTTTGGGGAATCCAAGAGTGTTGGTCTCTTAATGACGAAGGAATAGCTTTGTTGGAGTTCCGGGCAAGAATAACTTCTGATCCTTATTTTGCTTTGGCAAATTGGAATCCAAATGATTGTGATCCCTGCAAGTGGTTTGGTGTTCGTTGTGTTGATGGTAAAGTGCAAACATTGGACCTTAAAGGACTATCTTTGGAGGGGATATTGGCTCCTGAGCTTGGAAAGCTTAGTCACTTAAAATCTCTCATTTTGCGCAAGAATAACTTTTCGGGCGCTATTCCGGAAGAACTTGGAGATCTAGCCAAGCTGGAGCTATTGGATTTAAGGGAAAATAACTTGAGTGGAATTATCCCAACAGAAATTGTCAGGTTGTTATTGCTAAAACACTTGTTGCTTTGTAACAATAACAATGAATGTGGTGGTTCTGAATATGACAATGATGGTGGGTGTTCTCAATACGACGATGAAGGTGGTGGTTCTCAATATGATGGAGAGTTCAGATTTAAATCACTACTTGTTACCAATTTTTCAGAACCTCTAACAACATTGGTTACATGCATCAATAGAAAGTTTGGACACTGTGTGTGGAAGAGCAACTTGAAGGAATGGAATGAACCAGATTCAACGGTTAACCAAATTAAAGTAACACTTGCAAACTACCTCAGTGCTGTTGTGCTGCAACTGTTTAAGCTAGGAAAGTATACCCTAGATGGAAATGAAGAGAATTGTTGCGACCTTCTAACCGATTCTAATGAGATAGGCAATGTTGAAAACGTACCGGATCTAGACAATTCGGCACGTAGGAAGCTACTTGATCAGTCCAGTAACCTTGCAGCCGCGCCATATAGTGGCGAGGCTAATATAGGGATCAGCACTGACCCGGTTACACAAAGCAGTGGGGGGTTCCCAGCTGTGCCAGATGCAAAACAGAAGCAGAATCAAGCACCTCCAGCTCCACAGCTGCAGCCACCTTCTGATCCTAAAAGTGATGCTTCTTCTAGTGCAAATAAACCAACTCAGCAACCACATTCAGATAATGGTTCCTCTGGGAATTGGAGGAAGTATATTCTTATTATTGCACTTGTGATTGTGTTGGTCATTGTTATCATAATCATTATTTGCATTTGGCGTAAAAGAGCAGTGAAGGTAATAAAACCATGGAAGACAGGAATAAGTGGACAGTTGCAAAGGGCATTCATAACAGGAGTCCCCAAGTTGAATAGAGATGAACTAGAGACAGCTTGTGAGGATTTCAGCAATATTGTTAGTACTAAGTATGATGAGTGCATCATATACAAAGGAACCTTGTCCAGTGGAGTTGAGATCGCTGTTGTTTCTACTGTGATTAAATCTGCCCAAGATTGGTCAAAGAACACAGAGTTGAACTACCGGAGAAAGATTGATTCTCTGTCCCGAGTAAACCACAAGAACTTTGTTAACCTTATTGGCTACTGTGAGGAAGAAGAACCATTCACAAGGATGATGGTGTTGGAGTATGCTCCGAATGGATGCCTATTTGAGCATCTGCATGTTAGGGAAGTCGAACGTCTCAAATGGAGTGAAAGGATGAGGATTATCATGGGCACTGCCTATTGTCTTCAATACATGCATCATGACCTGAACCCACCAGTAACACATACTGACCTTAATGCACATTCGATCTTTTTGACAGATGACTTTGCCGCTAAGATTGCTCAGACCACATTCCGGAATATCGTATCACGCTCTGAGGCAAACAAAGAGAGGAGAAAGAAATCTGAGTTGCCACCCCATGATGATCCTGAAACCAATGTCTATTGCTTTGGGGTGCTGTTGCTAGAGATCGTTTCTGGGAGATTACCTCACTCTGTAGAACAAGGCAGCCTTCTGGATTGGGCTGCTGGGTACTTGAACGACAAGGGAAACTTCAAATATCTGATTGATCCAACTCTGCAATCTGTCAAAGACAATGAACTTGATGTCATATGTGAGGTGGTCAAAGAATGTATCCAACCTGATCCAAGGTTAAGACCAACAATGAGAGAAATCGCAATCAAATTAAGGGAAGCTCTTAGAATATCACCTGAGCAAGCAGTTCCAAGATTGTCTCCACTTTGGTGGGCTGAATTGGAGATCTTGTCAGTGGAAGCCACTTAA 2196 0.418 MGMRWNIFRFWLRIYVCLIALWGIQECWSLNDEGIALLEFRARITSDPYFALANWNPNDCDPCKWFGVRCVDGKVQTLDLKGLSLEGILAPELGKLSHLKSLILRKNNFSGAIPEELGDLAKLELLDLRENNLSGIIPTEIVRLLLLKHLLLCNNNNECGGSEYDNDGGCSQYDDEGGGSQYDGEFRFKSLLVTNFSEPLTTLVTCINRKFGHCVWKSNLKEWNEPDSTVNQIKVTLANYLSAVVLQLFKLGKYTLDGNEENCCDLLTDSNEIGNVENVPDLDNSARRKLLDQSSNLAAAPYSGEANIGISTDPVTQSSGGFPAVPDAKQKQNQAPPAPQLQPPSDPKSDASSSANKPTQQPHSDNGSSGNWRKYILIIALVIVLVIVIIIIICIWRKRAVKVIKPWKTGISGQLQRAFITGVPKLNRDELETACEDFSNIVSTKYDECIIYKGTLSSGVEIAVVSTVIKSAQDWSKNTELNYRRKIDSLSRVNHKNFVNLIGYCEEEEPFTRMMVLEYAPNGCLFEHLHVREVERLKWSERMRIIMGTAYCLQYMHHDLNPPVTHTDLNAHSIFLTDDFAAKIAQTTFRNIVSRSEANKERRKKSELPPHDDPETNVYCFGVLLLEIVSGRLPHSVEQGSLLDWAAGYLNDKGNFKYLIDPTLQSVKDNELDVICEVVKECIQPDPRLRPTMREIAIKLREALRISPEQAVPRLSPLWWAELEILSVEAT 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00340 731 PANTHER LRR RECEPTOR-LIKE KINASE 1 731 - -
Aip10g00340 731 Gene3D Transferase(Phosphotransferase) domain 1 520 712 - -
Aip10g00340 731 PANTHER PROTEIN MALE DISCOVERER 2 1 731 - -
Aip10g00340 731 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Aip10g00340 731 SUPERFAMILY Protein kinase-like (PK-like) 450 697 IPR011009 -
Aip10g00340 731 Pfam Protein tyrosine and serine/threonine kinase 451 699 IPR001245 GO:0004672|GO:0006468
Aip10g00340 731 MobiDBLite consensus disorder prediction 316 368 - -
Aip10g00340 731 ProSiteProfiles Protein kinase domain profile. 401 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00340 731 SUPERFAMILY L domain-like 28 157 - -
Aip10g00340 731 MobiDBLite consensus disorder prediction 345 368 - -
Aip10g00340 731 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Aip10g00340 731 Gene3D Phosphorylase Kinase; domain 1 413 519 - -
Aip10g00340 731 Gene3D Ribonuclease Inhibitor 29 163 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00340 Aip-Chr10 3419620 3423278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00340 337 706 Receptor kinase-like Gene Family AT4G02010 27.723 1.50e-33 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aip10g00340 PK_Tyr_Ser-Thr 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00340 - - adu:107468254 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00340 10 3419620 3423278 Aip10g00340 10 3419620 3423278 ECH