Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00339 ATGAATAATCCCACGGTAGTTGATCGGTTCTCTGGGTTCTACGATAACTGGATTTTGAAGCTCGAAGAGATCCTCCACCAGCTTCTCCACGTTTCCAACAACCACCACCTTTTCACCGAACAGGACCTTCAATCTCTGATTTCTAAAGTTACCACACACTTCAAGGAGTACTACACCGTGAAATGGAGTCTGGCACGCGAGGACGTTGTTGTCTTTTTTTCGCAGCCTTGGTTGACCCCTCTCGAAATTGCATACCTCTGGATCACGGGTTGGAAGCCTTCCACCGTCTTCAAGGTGCTGGAGTCTCTCAAAAAAGATAACTTATTTGGGATGACAGAAGAGCAACAGAGGAAGATAGGAGAGTTAAGGATGAGGATGAAGATGGAGGAGGAAAAGGTTGAGAGAGAGATGGAGAGGCAGCAGGTTGCCATGGCGAATAGCAAAATCGTGGAGCTGGCCAAGCTCTCCGGAAGAGCCACGTGGAAGAAACATAATAATGGAAAAGATCATGATGAGATGGTGCAGTTGGCGATGAAGGATGTGTTTGGGGGATTGGAGAGAATAATGAAAACTTCTGATTGTGCGAGGTTGAAGACCCTGAAAGGAATTTTGGACGTTCTTCGGTCAATACAGTGTGTTCACTTCTTAGTTGCTAATATTACTATACAACTTCGCATCAGGCAATGGGCGGGTACTACGAATGCTGGCCCAACTGCCGTTCAAGCGGAAGGTTTATTGGAGACGCCGACGATGGATACCGCGGGGATTGGGAGAGCTATAGCAGGTGCGGGATTTGAACAAATTGATGTGGAGAGCGATGTTGCTTCGGAGACGTCTGACACCAAacgggcggaagaagtgcaagaaaacagaaaggcttgggatctagcagtggaatctggagcggtgctatacaatgaggaagaggatatcatggcaatccttgaggcccagaatgagaaaatagctttgaggaagaagcaggctaaatag 993 0.4038 MNNPTVVDRFSGFYDNWILKLEEILHQLLHVSNNHHLFTEQDLQSLISKVTTHFKEYYTVKWSLAREDVVVFFSQPWLTPLEIAYLWITGWKPSTVFKVLESLKKDNLFGMTEEQQRKIGELRMRMKMEEEKVEREMERQQVAMANSKIVELAKLSGRATWKKHNNGKDHDEMVQLAMKDVFGGLERIMKTSDCARLKTLKGILDVLRSIQCVHFLVANITIQLRIRQWAGTTNAGPTAVQAEGLLETPTMDTAGIGRAIAGAGFEQIDVESDVASETSDTKRAEEVQENRKAWDLAVESGAVLYNEEEDIMAILEAQNEKIALRKKQAK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00339 330 Coils Coil 312 330 - -
Aip10g00339 330 PANTHER PROTEIN DOG1-LIKE 4 5 232 - -
Aip10g00339 330 PANTHER - 5 232 - -
Aip10g00339 330 ProSiteProfiles DOG1 domain profile. 7 236 IPR025422 GO:0006351|GO:0043565
Aip10g00339 330 Coils Coil 112 148 - -
Aip10g00339 330 Pfam Seed dormancy control 25 101 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00339 Aip-Chr10 3415250 3417560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00339 10 227 bZIP Transcription Factor Family AT3G12250 26.941 1.52e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00339 - - gmx:100808459 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00339 10 3415250 3417560 Aip10g00339 10 3415250 3417560 ECH