Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00338 ATGGCGGGTGTGGTTTCGAAGCAGCCCATGAGCACCACCACAACACCCAACAAAAAAGACTCAACGTCGTCGTCATCATCGAACCTCCTGCTAGGTCGGTTTGAGATCGGAAAACTGCTAGGTCACGGAACATTCGCGAAGGTGTACTGCGCAAAGAACGTGAAAACCGGAGAATGGGTGGCAATAAAGGTGATAGACAAAGAGAAGATCCTAAAAGGAGGGCTGGTGGCGCACATCAAGCGCGAGATCTCAATCCTCCGGCGCGTCCGCCACCCTAACATCGTTCAGCTCTTCGAGGTAATGGCAACCAAAACCAAAATCTACTTCGTCATGGAATACGTCCGCGGCGGCGAGCTCTTCAACAAGGTTGCAAAAGGAAGACTCAAAGAAGAAGTCGCCAGAAAGTACTTCCAGCAATTAATCTCCGCCGTCGGATTCTGTCACGAGAGAGGCGTCTACCACCGCGACCTCAAACCCGAGAATCTCCTCCTCGACGAGAACGGTAACCTTAAGGTCTCCGATTTCGGCCTCAGCGCCGTCTCCGATCAAATTCGCCAGGACGGTTTGTTCCACACGTTCTGTGGGACTCCGGCCTACGTGGCACCGGAGGTTCTCGGTCGAAAGGGCTACGACGGCGCAAAAGTTGATCTGTGGTCTTGCGGTGTCGTTTTGTTCGTTTTGATGGCAGGGTACTTGCCGTTTCACGATCAGAACGTGATGCAGATGTATAAGAAGATCTACAAAGGTGAATTCCGGTGCCCTAGGTGGTTCTCCCCTGATCTCGCCAATCTCCTCACCAGGCTCCTCGACACTAAGCCCGAGACGCGGATCGCCATTCCCGAAATCATGCAGAACAAGTGGTTCAAGAAAGGCTTCAAGCAAATCAAGTTCTATGTCGAAGACGATAGGCTCTGTAGTTTCGATGATACTGAAAACATGATCATGGAGGATCATAATGTTAATAGCATTAATAGCAGTAATCATCCTTCTAATATCAGTAACTGCGGAGACGATGACAACGCTTCTGTTTCGGATTACGCTGAATCTGATTCTGAGGTTGAGATTAAGAGAAGACATAGCGTTAGCAATCCTCCTTTGCCTCGGCCTGCGAGTTTGAATGCGTTCGACATAATTTCGTTTTCCAAGGGATTCGATCTCTCTGGATTGTTCGAGGAGAAAGGGGACGAGGCCAGGTTTGTGACGTCGGCGCCGGTTGGGAAGATTATATCGAAATTGGAGGAGATTGCACACTTGGTTAGATTCTCGGTGAGGAAGAAGGATTGCAGGGTGAGCTTGGAAGGAACAAGGGAAGGTTTGACGGGTCCATTGACGATTGCTGTTGAGATATTCGAGCTGACACCGAAGCTTGTAGTGGTTGAGGTGAAGAAGAAAGGAGGAGACAGAGCAGAGTATGAGAGGTTCTGCAACATTGAATTGAGGCCTGGCTTGATGAACTTGATGAAAGAGGAGGAATCCTGTTCATCCAGTTTTAGTAGCTCTGCTTCTCCTGCCAATGGAATTAGCAGCGATTCTACTCCTCATTATCATCATCACCATCCCCCATTGCTGCGTGTGCTTTCAGAACCTGCCAATAAGATATCTTCTGCTTTGGATGATCCTGTTGAGTATCGACCTCCAGCTTCAGAGGCTTAA 1653 0.4924 MAGVVSKQPMSTTTTPNKKDSTSSSSSNLLLGRFEIGKLLGHGTFAKVYCAKNVKTGEWVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHERGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMQMYKKIYKGEFRCPRWFSPDLANLLTRLLDTKPETRIAIPEIMQNKWFKKGFKQIKFYVEDDRLCSFDDTENMIMEDHNVNSINSSNHPSNISNCGDDDNASVSDYAESDSEVEIKRRHSVSNPPLPRPASLNAFDIISFSKGFDLSGLFEEKGDEARFVTSAPVGKIISKLEEIAHLVRFSVRKKDCRVSLEGTREGLTGPLTIAVEIFELTPKLVVVEVKKKGGDRAEYERFCNIELRPGLMNLMKEEESCSSSFSSSASPANGISSDSTPHYHHHHPPLLRVLSEPANKISSALDDPVEYRPPASEA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00338 550 MobiDBLite consensus disorder prediction 323 340 - -
Aip10g00338 550 Gene3D Transferase(Phosphotransferase) domain 1 24 361 - -
Aip10g00338 550 SMART serkin_6 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00338 550 PANTHER - 19 491 - -
Aip10g00338 550 CDD CIPK_C 373 483 - -
Aip10g00338 550 SUPERFAMILY Protein kinase-like (PK-like) 30 289 IPR011009 -
Aip10g00338 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Aip10g00338 550 Gene3D Kinase associated domain 1, KA1 367 488 - -
Aip10g00338 550 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 491 - -
Aip10g00338 550 MobiDBLite consensus disorder prediction 323 343 - -
Aip10g00338 550 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Aip10g00338 550 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00338 550 CDD STKc_SnRK3 33 287 - -
Aip10g00338 550 MobiDBLite consensus disorder prediction 494 511 - -
Aip10g00338 550 MobiDBLite consensus disorder prediction 1 26 - -
Aip10g00338 550 MobiDBLite consensus disorder prediction 494 529 - -
Aip10g00338 550 ProSiteProfiles Protein kinase domain profile. 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00338 550 ProSiteProfiles NAF domain profile. 367 391 IPR018451 GO:0007165
Aip10g00338 550 Pfam NAF domain 369 425 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00338 Aip-Chr10 3393855 3395984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00338 13 490 CBL-interacting serine-threonine protein kinases AT4G18700 73.486 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip10g00338 Pkinase 5.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00338 - - adu:107468323 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00338 10 3393855 3395984 Aip10g00338 10 3393855 3395984 ECH