Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00324 ATGAGGACATTTTGGAATGCGGCAGCGATCGACGACGATGCAATTGCGAGGGGAGGAGCGCTGCGGCAGCGATCTGCGAACTGCGAGGAGAGGGGAAGAAGGGCGAGTGGTCGCCGAACAATGGCGCGGTGGCGTAACGGCATGTTGCTGTCCTTCGCACGGGCTCCTGCATCAATAGCGGTGGCTGCGGCGATCTGCAATGAGAACGGGGTGACGGAAGTCTGGTCGGTGCCGCCGCAACGTGGTAACGACGTGAAGAAAAGTTGCTGCCGCGCTGCTGCATTTCACTTCCTTCCACAAAGCGCCATGGCATCGGAGAAGAAGCTTGCGAACCCTATGAGGGAAATCAAAGTGCAGAAGCTTGTCCTCAACATCTCCGTCGGCGAGAGCGGCGATCGTCTCACCAGAGCTTCCAAGGTCTTGGAACAGCTCAGCGGCCAAACCCCTGTCTTCTCCAAGGCTAGGTACACTGTGCGTTCATTTGGAATAAGGCGTAATGAAAAGATTGCTTGCTATGTCACCGTTAGGGGAGACAAGGCCATGCAACTTCTTGAGAGTGGGTTGAAGGTCAAGGAGTATGAGCTGCTTAGGAGGAATTTCAGCGATACTGGCTGCTTTGGTTTTGGAATCCAGGAGCACATTGATCTCGGGATCAAGTATGATCCTTCTACTGGGATCTACGGCATGGATTTCTTTGTCGTCTTAGAGCGTGCTGGATACCGTGTGGGTAGGCGGAGGAGACGAAAGTCCCGCGTTGGAATTCAACACAGGGTCACCAAAGAAGATGCAATGAAGTGGTTTCAAGTTAAGTACGAAGGAGTTATTCTTAACAAGTCCCAACAAATTGTATCCTAG 855 0.5287 MRTFWNAAAIDDDAIARGGALRQRSANCEERGRRASGRRTMARWRNGMLLSFARAPASIAVAAAICNENGVTEVWSVPPQRGNDVKKSCCRAAAFHFLPQSAMASEKKLANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRRKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIVS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00324 284 Pfam Ribosomal protein L5 111 164 IPR031310 -
Aip10g00324 284 Pfam ribosomal L5P family C-terminus 168 266 IPR031309 -
Aip10g00324 284 SUPERFAMILY RL5-like 111 275 IPR022803 -
Aip10g00324 284 Gene3D - 103 279 IPR022803 -
Aip10g00324 284 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 90 283 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aip10g00324 284 ProSitePatterns Ribosomal protein L5 signature. 141 157 IPR020929 GO:0003735|GO:0005840|GO:0006412
Aip10g00324 284 PANTHER 60S RIBOSOMAL PROTEIN L11-1 90 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00324 Aip-Chr10 3295375 3297441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00324 103 282 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.444 4.96e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00324 K02868 - gmx:100791687 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00324 10 3295375 3297441 Aip10g00324 10 3295375 3297441 ECH