Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00320 ATGGCCAATCTATTTAGAAGTTGTTCATTATTACTTTCGGTTTCCTTGATTATTATATTGTGTGTGCCATCAAGAGTGAATTGTACTGAGTTTGAAGTTGGGGGTCACGATGGCTGGATTGTTCCTAAGTCAAGAGACAACGATCAAATGTATAATCAATGGGCATCCCAGAACAGATTTAAAGTTGATGACACTCTTCgtTTCAAGTACTCTAAAGATTCAGTGTTGGTGGTGAGTGAAGAGGAGTATGAAAGCTGCAGATCCACTAAGCCACTATTCTTCTCCAACAATGGTGACACTGTCTTCAAATTTGAGCATCCTGGAGTGTACTACTTCATTAGCGGGGTTAGCGGCCACTGTGACAGAGGACAGAAAATGATTGTTAAGGTTTTGGCCGTACATAATCCAAAGCCAGAGCCACCACATTCACACTCACCAGCAGTAGCACCAGCATTTACACCTGCATCTACACCTGCACCTTCTCCTTCTCATCATTCTAATGCTGGAAGACCAATTCCTCTTCTCAGCATAACTAACTTGCCGCTCTTTCTTATCGTACTTCTTCCTATGCTTTTTGCTTGA 582 0.4192 MANLFRSCSLLLSVSLIIILCVPSRVNCTEFEVGGHDGWIVPKSRDNDQMYNQWASQNRFKVDDTLRFKYSKDSVLVVSEEEYESCRSTKPLFFSNNGDTVFKFEHPGVYYFISGVSGHCDRGQKMIVKVLAVHNPKPEPPHSHSPAVAPAFTPASTPAPSPSHHSNAGRPIPLLSITNLPLFLIVLLPMLFA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00320 193 Gene3D - 28 134 IPR008972 -
Aip10g00320 193 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Aip10g00320 193 MobiDBLite consensus disorder prediction 137 167 - -
Aip10g00320 193 Pfam Plastocyanin-like domain 48 124 IPR003245 GO:0009055
Aip10g00320 193 PANTHER BLUE COPPER PROTEIN 17 147 IPR039391 GO:0009055
Aip10g00320 193 MobiDBLite consensus disorder prediction 139 157 - -
Aip10g00320 193 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Aip10g00320 193 CDD OsENODL1_like 29 131 IPR041846 -
Aip10g00320 193 PANTHER EARLY NODULIN-LIKE PROTEIN 5 17 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00320 Aip-Chr10 3282895 3283683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00320 11 131 Phytocyanin Superfamily AT3G18590 64.463 1.57e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00320 - - ahf:112718106 296.589