Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00304 ATGAGGAATTGTGATGAATGGAAACCTTTTGTAGTAATGGTAGCAATTGATTTTTGTTTTGCAGCAGTGAATATTATTCTCAAGAAAGTTCTTGAAGAAGGAATGAACCATTTGGTTTTTATTACATACCGTTTATCAATTGCTACCATTCTCTTAGCTCCAATCGGATACTTTAGGGAAAGAAACAGTAGGCCAAGGCTCACATTTCGAGTTCTATGTTACATCTTCTTCAGTGCTATTGTGGGGGCATCAGTGACACAATATTTCTTCCTGCTGGGGATCCAATATACTTCTGCTACCTTTGCTTGTGCATTCATCAACATGGTGCCTGTGATCACGTTCATTATGGCATTACCATTCGGGTTAGAGAGTGTGAAGATCAAGTGCAAGAGTGGGAGAGCGAAGATTCTTGGGACATTGGTGTGCATAGGGGGTGCATTGTTGTTGACACTCTATAAAGGAAAGGCCTTGTTTAACTATTCTTCTGCAACTTCTATAGCAAAGACTGGAACAAGTAGTAGTAGTAGTAGTGGAAGATGGACTATTGGTGTTGTGGCTTTGATTCTTGGAACACTGTTTTGGTCATCTTGGTATATAGTACAATCAAGCATAAGCAAGAGGTTCCCATGTCAATACTCAAGTACAGCCATGATGACCTTCTTTGGAGCCATTCAAGCAGCTTTCATAAGCTTCTCCATTCAACACCATGATTTCTCCATTTGGGTTCTCAAGGGAAAGCTTCCAATAATTGCTGTTCTCTTCTCTGGGATGATTGGATCAGGATTGTGTTTTGTGGGGATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATCATGGCTGCCATGATTGATATCCCTATCTTGCATGAGCAACTACATCTTGGAAGTGTCTTGGGATCGATGTTGGTGATGATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATTCAGAATTGTGTCATCAAGTTAGTCCAAGACTCTGAACAAAGTCAACAAACCAAGGAACAAGATCCGGAAATACAAGAAGCTACGGTTTCTTCTCCAACGCGCCGCTGCCATGGCCGTCAACGGCGTGCCGGCTGTCGCTTCCTGAGTGCCTCCACTGCTTCCATTTGTGTCCCCCTTTTTCACTTTCCGCCACCTTCCACTACGACGGCAGCATCAGCGGTTTGCCAAGCTCCTAGCCGACCACCACAACCTTATAGCACATCGCTGTCGCGTGCTGCCGCTTCAACCGCCGCGAACATCGTCGCCATCCTCATTCAATATCCTCGGTAA 1314 0.446 MRNCDEWKPFVVMVAIDFCFAAVNIILKKVLEEGMNHLVFITYRLSIATILLAPIGYFRERNSRPRLTFRVLCYIFFSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALPFGLESVKIKCKSGRAKILGTLVCIGGALLLTLYKGKALFNYSSATSIAKTGTSSSSSSGRWTIGVVALILGTLFWSSWYIVQSSISKRFPCQYSSTAMMTFFGAIQAAFISFSIQHHDFSIWVLKGKLPIIAVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPILHEQLHLGSVLGSMLVMMGLYILLWGKSKEIQNCVIKLVQDSEQSQQTKEQDPEIQEATVSSPTRRCHGRQRRAGCRFLSASTASICVPLFHFPPPSTTTAASAVCQAPSRPPQPYSTSLSRAAASTAANIVAILIQYPR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00304 437 MobiDBLite consensus disorder prediction 342 362 - -
Aip10g00304 437 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Aip10g00304 437 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 326 - -
Aip10g00304 437 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Aip10g00304 437 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Aip10g00304 437 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Aip10g00304 437 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Aip10g00304 437 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00304 Aip-Chr10 3140211 3146991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00304 6 329 Nodulin-like Gene Family AT1G11460 38.769 5.50e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00304 - - gmx:100803670 558.525