Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00300 ATGTTGCTGGAGAACTTCAAGGAACAGCTTGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGTGAAGAGGCAGGTTGGGATGTGTGGTTGAAACCATATACACATGAAACTCTCGTTGAGCTTGGTCAGAAAGGTGTGAGGAGTCTTTTAGCTGTTCCAGTGAGGTAA 390 0.4667 MLLENFKEQLALSVRSIQWSYAIFWVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKAVEASPQTKRRSAALSPEDLTDTECEEAGWDVWLKPYTHETLVELGQKGVRSLLAVPVR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00300 129 PANTHER TRANSCRIPTION FACTOR TT8 5 94 - -
Aip10g00300 129 PANTHER TRANSCRIPTION FACTOR EGL1 5 94 - -
Aip10g00300 129 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 96 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00300 Aip-Chr10 3119290 3121455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00300 4 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 60.000 3.47e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00300 - - aip:107636116 231.491