Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00299 ATGATTAGCAATTCCAATTCATTAATGTTGATGATGGTATTAATACTGGTTGGCACGGGGCCGGGGATATGCCACGGTGAAGATGGGTGTGGAGGACACAGGTGCGGACGCCATGGCCCTCCGATTCGATTCCCATTCCGTCTTAAAGACAAGGAGCCCCCTCACTGCGGTTACCCTGCCTTTGATCTCACTTGTTCTGATTCTCATGACACCTTCATTGAGTTCTCTGCTTCTCCTGTCCCACTTAAACTCCTTGTCACTGATATCCAATATGAATATAACTATTTCCGAGTCTCTGACACGCAAAATTGCCTTCCCACCCACTTGCTCAAACTCATAAAAAATTCTTCCTCAATTTCTCCTTTCCAGTTCAGTCGGGATCAGACTCTGAACGATGTATCTTTCTTCAATTGTTCACCCGATCCGCAATATCAACTCTCCTGCCCCATTTACGTTGCTGACAGCTACGATTCACTCCTCAGTTCCAATCTCGTATCTTGCACCAAGATTTTTGACATTTCTTCAACCTTCTATGACTCAGAAATGGTAGATTTGTACAATACTTTGAATTTGTGGTGGTCGAAACCTAATTGTAGCATGTGTGAAACACAAGGCAAGAGATGTAAACTGAAGAACAATGGCACTCAAGGTGAAGTTGAGTGCTTCCGCCACCATCATAATAACTTGCTCTTTGGCTCCACAGGTGTTGTGGCAGGTTTAATTCTGCTGGCAGCAGTGGCTACTGCAGTGTTTAAGATCTATCAACATTTTAGAATGAAAGGAGAAGATCGAGCAAGAATTGACAAGTTCTTGGAAGATTACAGGGCACTCAAGCCTACCAGATTCTCTTATGCTGATGTAAAGAGGATCACAAATGGTTTCAAGGACAAGCTGGGTGAAGGAGGTCATGGAGCAGTCTTCAAGGGCATGCTCTCCTCAGAAATCGGCGTAGCTGTCAAGATACTCAACAGCAACACGGAGGGTAAAGGAAAAGATTTCACCAACGAGGTGGGAACCATGGGAAAAATTCACCATGTCAATGTGGTTCGCTTACTTGGCTTTTGTGCGCAAGGAGTTCATTGTGCTCTAGTTTATGATTTCTTTCCAAAAGGTTCATTGCAAAACTTCATATCCACGCCAGATAACAAGGACGTCTTCCTTGGATGGGAGAAGCTTCACCAAATTGCCCTTGGTGTTGCTAGAGGCATTGAGTATCTTCACCATGGTTGTGAGCAACAGATCCTTCATTTTGACATCAATCCCCACAATATCTTACTAGATGACAACTTCACTCCCAAGATTACTGATTTTGGGCTTGCCAAGTTGTGTTCCAAAGATCAGAGCAAAGTTTCAATGACCGCAGCCAAGGGAACCATGGGCTACATTGCGCCTGAAATTGTCTCAAGAAACTTTGGAAATGTGTCTTACAAAGCAGACATTTATAGCTATGGGATATTGTTGCTTGAAATGGTAGGAGGAAGGAAAAACATAGAGATGGAAGTTGAGGGGTCTTTAAGGATTTTATACCCCGAATGGATGCACAACTTGCTTGATGGGGGAGATTTTCATGTACACATCGAAGATGAGGAAGACAATAAACTTGCAAAGAAAATTGCAATTGTTGGACTACAATGCATTCAGTGGCAGCCATCAGATCGTCCTTCCATCAAAACTGTCATAAGTATGTTAGAAGGAGATGCAGACAAATTAAATGTACCTCGTAATCTTTTCGACTTAACAAATTCTATTAGCAGAGGACGACAAATAACCCACCAGACAAGGCCTCTAAATTTAGAGTTGGAGAGGATAAAGATATTTTCAAAAAGTAGCAGTTACCTTCAAGTACCCGCTCTCAACTTGCAACCCTTTATCCCTCTTTTACAACTCTTGGAAACTTCAATCGGTGCTGCCTCCGCCGGCGCACCCTCCATCGGCGCGCCCTCCGTCGGCGTTCACTCTCGCTCGCAAGGCCTCCATCAGCGCTCGTTCTCTCTTGCTCAAACCTTACCTCCGTCGACGCTGACTCAATCGTCGCTGCCTCTCCCTCAATCGTCGTTCCTCCCTCAATCGGCGCTCAACCCTCACCATAACACAAGAAGGTTTCATGGGGAGAATCAAGTATGA 2124 0.4449 MISNSNSLMLMMVLILVGTGPGICHGEDGCGGHRCGRHGPPIRFPFRLKDKEPPHCGYPAFDLTCSDSHDTFIEFSASPVPLKLLVTDIQYEYNYFRVSDTQNCLPTHLLKLIKNSSSISPFQFSRDQTLNDVSFFNCSPDPQYQLSCPIYVADSYDSLLSSNLVSCTKIFDISSTFYDSEMVDLYNTLNLWWSKPNCSMCETQGKRCKLKNNGTQGEVECFRHHHNNLLFGSTGVVAGLILLAAVATAVFKIYQHFRMKGEDRARIDKFLEDYRALKPTRFSYADVKRITNGFKDKLGEGGHGAVFKGMLSSEIGVAVKILNSNTEGKGKDFTNEVGTMGKIHHVNVVRLLGFCAQGVHCALVYDFFPKGSLQNFISTPDNKDVFLGWEKLHQIALGVARGIEYLHHGCEQQILHFDINPHNILLDDNFTPKITDFGLAKLCSKDQSKVSMTAAKGTMGYIAPEIVSRNFGNVSYKADIYSYGILLLEMVGGRKNIEMEVEGSLRILYPEWMHNLLDGGDFHVHIEDEEDNKLAKKIAIVGLQCIQWQPSDRPSIKTVISMLEGDADKLNVPRNLFDLTNSISRGRQITHQTRPLNLELERIKIFSKSSSYLQVPALNLQPFIPLLQLLETSIGAASAGAPSIGAPSVGVHSRSQGLHQRSFSLAQTLPPSTLTQSSLPLPQSSFLPQSALNPHHNTRRFHGENQV 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00299 707 MobiDBLite consensus disorder prediction 685 707 - -
Aip10g00299 707 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 600 IPR045874 GO:0004672
Aip10g00299 707 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Aip10g00299 707 Gene3D Transferase(Phosphotransferase) domain 1 368 577 - -
Aip10g00299 707 ProSiteProfiles Protein kinase domain profile. 292 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00299 707 Pfam Wall-associated receptor kinase galacturonan-binding 30 100 IPR025287 GO:0030247
Aip10g00299 707 SUPERFAMILY Protein kinase-like (PK-like) 275 564 IPR011009 -
Aip10g00299 707 Pfam Protein kinase domain 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00299 707 PANTHER RECEPTOR-LIKE KINASE 19 600 - -
Aip10g00299 707 Gene3D Phosphorylase Kinase; domain 1 268 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00299 Aip-Chr10 3116249 3119246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00299 34 573 Receptor kinase-like Gene Family AT5G38260 36.707 1.99e-95 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip10g00299 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00299 - - aip:107619931 1148.65