Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00296 ATGGTGGAAGGATATCTTGTTCCAAATATGATTAGCAATTCCAATTCATTAATGTTGATGATGGTATTAATACTGGTTGGCACGGTGCCGGGGATATGCCACGGTGAAGATGGGTGTGGAGGACACAGGTGCGGATGCCATGGCCCTCCAATTCGATTCCCATTCCGTCTTAAAGACAAGGAGCCCCCTCACTGTGGTTACCCTGCCTTTGATCTCACTTGTTCTGATTCTCATGATACCTTCATTGAGTTCTCTGCTTCTCCTGTCCCACTTAAACTCCTTGTCACTGATATCCAATATGAATATAACTCTTTCCAAGTCTCTGACACGCAAAATTGCCTTCCCGCCCACTTGCTCAAACTCATAAAAAATTCTTCCTCAATTTCTCCTTTCCAGTTCAGTCGGGATCAAACTCTGAACGATATATCTTTCTTCAATTGTTCACCTGATCCGCAATATCAACTCTCCTGCCCCATTTACGTTGCTGACAGCTACGATTTACTCCTCAGTTCCAATCTCGTATCTTGCACCAAGATTTTTGACATTTCTTCAACCTTCTATGACCCACAATTAGTAGTTTGGTACAATACTTTGGATTTGTTGTGGTCGAAACCTAATTGTAGCATGTGTGAAACACAAGGCAAGAGATGTAAACTGAAGAACAATGGCACTCAAGGTGAAGTTGAGTGCTTCGGCCACCATCATAATAACTTGCTCTTCGGTTCTACAGGTGTTGTGGCAGGTTTAATTCTGCTGGCAGCAGTGGCTATTGCAGTGTTTAAGATCTATCAACATTTTAGAATGAAAGGAGAAGATCGAGCAAGAATTGACAAGTTCTTGGAAGATTACAGGGCACTCAAGCCTACCAGATTCTCTTATTCTGATATAAAGAGGATCACAAATGGTTTCAAGGACAAGCTGGGTGAAGGAGGTCATGGAGCAGTCTTCAAGGGCATGCTCTCCTCGGAAATTGGCGTAGCTGTGAAGATACTCAACAGCAACACAGAGGGTGAAGGGAAAGATTTCACCAACGAGGTGGGAACCATGGGCAAAATTCACCATGTCAATGTGGTTCGCTTACTTGGCTTTTGTGCGCAAGGATTTCATTGTGCTCTAGTTTATGATTTCTTTCCAAAAGGTTCATTGCAAAACTTCATATCCACGCCAGATAACAAGGACGTCTTCCTTGGATGGGAGAAGCTTCACCAAATTGCCCTTGGTGTTGCTAGAGGCATTGAGTATCTTCACCATGGTTGTGAGCAACAGATCCTTCATTTTGACATCAATCCCCACAATATCTTACTAGATGACAACTTCACTCCCAAGATTACTGATTTTGGGCTTGCCAAGTTGTGTTCCAAAGATCAGAGCAAAGTTTCAATGACAGCAGCCAAGGGAACCATGGGCTACATTGCGCCTGAAATTGTCTCAAGAAACTTTGGAAATGTGTCTTACAAAGCAGACATTTATAGCTATGGGATATTGTTGCTTGAAATGGTAGGAGGAAGGAAAAACATAGAGATGGAAGTTGAGGGGTCTTTAAGGATTTTATACCCCGAATGGGTGCACAATTTGCTTGATGGGGGAGATTTTCAAGTACACATTGAAGATGAGAAAGACAATAAACTTGCAAAGAAAATTGCAATTGTTGGACTACAATGCATTCAGTGGCAGCCATCAGATCGTCCTTCCATCAAAACTGTCATAAGTATGTTAGAAGGAGATGCAGACAAATTAAGTGTACCTCGTAATCTTTTCGACTTAACAAACTCTATTAGCAGAGGACGACGAATAACCCACCAGACAAGGCCTTTAAATTTAGAGTTGGAGAGGATTGAAGAATTAGATCATTGTCAAACAAGTCCTTTCTAA 1872 0.4204 MVEGYLVPNMISNSNSLMLMMVLILVGTVPGICHGEDGCGGHRCGCHGPPIRFPFRLKDKEPPHCGYPAFDLTCSDSHDTFIEFSASPVPLKLLVTDIQYEYNSFQVSDTQNCLPAHLLKLIKNSSSISPFQFSRDQTLNDISFFNCSPDPQYQLSCPIYVADSYDLLLSSNLVSCTKIFDISSTFYDPQLVVWYNTLDLLWSKPNCSMCETQGKRCKLKNNGTQGEVECFGHHHNNLLFGSTGVVAGLILLAAVAIAVFKIYQHFRMKGEDRARIDKFLEDYRALKPTRFSYSDIKRITNGFKDKLGEGGHGAVFKGMLSSEIGVAVKILNSNTEGEGKDFTNEVGTMGKIHHVNVVRLLGFCAQGFHCALVYDFFPKGSLQNFISTPDNKDVFLGWEKLHQIALGVARGIEYLHHGCEQQILHFDINPHNILLDDNFTPKITDFGLAKLCSKDQSKVSMTAAKGTMGYIAPEIVSRNFGNVSYKADIYSYGILLLEMVGGRKNIEMEVEGSLRILYPEWVHNLLDGGDFQVHIEDEKDNKLAKKIAIVGLQCIQWQPSDRPSIKTVISMLEGDADKLSVPRNLFDLTNSISRGRRITHQTRPLNLELERIEELDHCQTSPF 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00296 623 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Aip10g00296 623 ProSiteProfiles Protein kinase domain profile. 301 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00296 623 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 609 IPR045874 GO:0004672
Aip10g00296 623 Gene3D Phosphorylase Kinase; domain 1 277 376 - -
Aip10g00296 623 PANTHER RECEPTOR-LIKE KINASE 28 609 - -
Aip10g00296 623 Pfam Wall-associated receptor kinase galacturonan-binding 43 109 IPR025287 GO:0030247
Aip10g00296 623 Gene3D Transferase(Phosphotransferase) domain 1 377 584 - -
Aip10g00296 623 Pfam Protein kinase domain 304 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00296 623 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00296 Aip-Chr10 3101948 3103977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00296 14 582 Receptor kinase-like Gene Family AT5G38260 35.714 2.36e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip10g00296 Pkinase 8.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00296 - - aip:107619931 1238.79